Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 AL161670.1-201ENST00000554348 137 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 SUB1P3-201ENST00000564581 315 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 AC069114.2-201ENST00000604699 304 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RPL17P51-201ENST00000605218 238 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 Y_RNA.51-201ENST00000362725 102 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 SNORA33-201ENST00000363664 130 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 RNU6-522P-201ENST00000364497 107 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 Y_RNA.372-201ENST00000365599 102 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 RNU6-968P-201ENST00000384076 107 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 MIR521-1-201ENST00000384902 87 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 MTCO3P40-201ENST00000392516 676 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 MIR1267-201ENST00000408723 78 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 RNU2-7P-201ENST00000410794 178 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 ARL5AP1-201ENST00000418991 388 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 RPL31P58-201ENST00000469001 379 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 HMGN1P13-201ENST00000505795 138 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AC011406.1-201ENST00000512440 370 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AC100821.1-201ENST00000523153 2479 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AP000907.4-201ENST00000604143 237 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 AC124864.2-201ENST00000624736 186 ntBASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC50Q8IVM0 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1085P-201ENST00000363576 107 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AC067942.3-201ENST00000512025 362 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 Y_RNA.704-201ENST00000516851 102 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AC016256.1-201ENST00000547971 354 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 RRN3P3-201ENST00000549207 578 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 CPDP1-201ENST00000579660 283 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 RNU6-89P-201ENST00000606519 100 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 MIR8063-201ENST00000621930 81 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 BX322639.1-202ENST00000423987 2213 ntBASIC1.35□□□□□ -2.19
CCDC50Q8IVM0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 Y_RNA.67-201ENST00000362870 100 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 RNA5SP99-201ENST00000364020 114 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 U8.10-201ENST00000384260 133 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 RNU6-331P-201ENST00000384724 107 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 EIF4E2P1-201ENST00000393781 255 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 MTCO1P21-201ENST00000416634 589 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC098826.2-201ENST00000452011 651 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 RNU7-187P-201ENST00000458985 68 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC108210.2-201ENST00000503681 201 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC091885.1-201ENST00000506658 268 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 FGF7P1-201ENST00000582820 288 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 MIR4753-201ENST00000585119 83 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC146944.4-201ENST00000602697 718 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AL050343.2-201ENST00000607338 280 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AC104458.1-201ENST00000608243 463 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 TCL6_2.1-201ENST00000615162 119 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 AL359880.1-201ENST00000621879 266 ntBASIC1.34□□□□□ -2.19
CCDC50Q8IVM0 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 RNU6-1252P-201ENST00000363054 104 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.231-201ENST00000364358 102 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 SNORA63D-201ENST00000364359 132 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 SNORD1A-201ENST00000364968 72 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 SNORA4.2-201ENST00000365313 147 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 RNU6-214P-201ENST00000384130 107 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 RNU6-1042P-201ENST00000384204 107 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 MIR300-201ENST00000401138 83 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 SNORA11.2-201ENST00000408318 127 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 AC073910.1-201ENST00000445047 438 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 RPL36AP21-201ENST00000490372 323 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.693-201ENST00000516641 110 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 AL512360.1-201ENST00000555346 234 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 MIR8076-201ENST00000611401 83 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 AC073534.2-201ENST00000620377 381 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 MIR338-201ENST00000636369 67 ntBASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC50Q8IVM0 ICE2P2-201ENST00000483823 2787 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.481-201ENST00000384373 102 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms