Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 snoU13.6-201ENST00000458785 104 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.631-201ENST00000459607 101 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 RPL30P10-201ENST00000488148 337 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 SNORD116.3-201ENST00000517176 78 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 AL078605.1-201ENST00000603529 500 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 AC137590.2-201ENST00000619709 240 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 MTND4P27-201ENST00000450813 1354 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.314-201ENST00000365114 102 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 SNORA12.2-201ENST00000391040 156 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MTCYBP2-201ENST00000407745 171 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 U6atac.2-201ENST00000408644 118 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MTCO3P29-201ENST00000432119 779 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC099799.1-201ENST00000439809 192 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AF186996.7-201ENST00000492781 209 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC026241.1-201ENST00000517873 2142 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC105245.1-201ENST00000581934 244 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC100812.1-201ENST00000607622 580 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MIR1244-1-201ENST00000612829 85 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MIR1244-3-201ENST00000635744 85 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MIR1244-2-201ENST00000636449 85 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 MIR1244-4-202ENST00000636813 85 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AC099654.10-201ENST00000640395 161 ntBASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.85□□□□□ -1.95
KRT28Q7Z3Y7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-541P-201ENST00000384709 110 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 MIR625-201ENST00000385047 85 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 MIR208B-201ENST00000401172 77 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 MIR548P-201ENST00000408336 84 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AL139156.1-201ENST00000412785 841 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 PMCHL1-202ENST00000423102 261 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 RNU7-87P-201ENST00000459343 62 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 TOMM22P6-201ENST00000465035 409 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC105758.1-201ENST00000506038 399 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 RNA5SP182-201ENST00000516064 82 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC110588.1-201ENST00000559699 137 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 CYP4A27P-201ENST00000567218 190 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC104581.2-201ENST00000572227 430 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 MIR3117-201ENST00000584034 78 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC010928.2-201ENST00000588017 287 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 AL353621.2-201ENST00000605340 133 ntBASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.84□□□□□ -1.95
KRT28Q7Z3Y7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-308P-201ENST00000390957 107 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 AC019129.1-201ENST00000403786 261 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 AL353752.1-201ENST00000454946 260 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 RNU7-4P-201ENST00000516961 62 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 GNAI2P1-201ENST00000541815 315 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 ANP32BP3-201ENST00000559213 706 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 RMST_6.1-201ENST00000611980 203 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.83□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 Y_RNA.326-201ENST00000365176 113 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 MIR153-2-201ENST00000385225 87 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 MIR190B-201ENST00000401119 79 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 HMGB3P2-201ENST00000411913 584 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AL035666.1-201ENST00000446195 348 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AC090096.1-201ENST00000489168 390 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AC145146.1-201ENST00000496370 254 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AC144568.1-201ENST00000520139 137 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AL355802.3-201ENST00000607571 545 ntBASIC2.82□□□□□ -1.96
KRT28Q7Z3Y7 AC007742.2-201ENST00000618226 398 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms