Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 SNORD114-30-201ENST00000364448 72 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 MIR10B-201ENST00000385011 110 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 MIR147B-201ENST00000390185 80 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 SNORD78.2-201ENST00000391076 69 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-159P-201ENST00000391080 106 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-121P-201ENST00000410525 99 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AL590135.1-201ENST00000422215 156 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AC019205.3-201ENST00000424573 156 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 PCNPP5-201ENST00000452246 481 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AIG1P1-201ENST00000503376 148 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AC234781.5-201ENST00000508429 271 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 SNORA31.16-201ENST00000516773 139 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-58P-201ENST00000517143 103 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AC008739.2-201ENST00000597006 317 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AL138963.2-201ENST00000605137 226 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AC005520.5-201ENST00000613926 164 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 AC069528.2-201ENST00000624849 1991 ntBASIC3.07□□□□□ -1.92
UBE3BQ7Z3V4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.105-201ENST00000363182 111 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 RNU1-105P-201ENST00000363470 161 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 RNA5SP456-201ENST00000364002 114 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.376-201ENST00000365638 108 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 SNORD21-201ENST00000383953 95 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.461-201ENST00000384263 103 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 MT-TW-201ENST00000387382 68 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AL133475.1-201ENST00000404414 305 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AC108059.2-201ENST00000434626 151 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 RPS15AP7-201ENST00000439294 405 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 RPS27AP9-201ENST00000477681 438 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 TRBV12-1-201ENST00000479785 344 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 GZMAP1-201ENST00000503054 631 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 RNU2-53P-201ENST00000516257 147 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AP003733.2-201ENST00000529409 171 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AC023157.2-201ENST00000540596 141 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 MIR5092-201ENST00000583139 88 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 uc_338.14-201ENST00000613162 166 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 AC240442.1-201ENST00000616055 283 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 SNORD98-201ENST00000636377 67 ntBASIC3.06□□□□□ -1.92
UBE3BQ7Z3V4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 MAPK10-266ENST00000641066 6555 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 SNORD114-19-201ENST00000363072 75 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-529P-201ENST00000363383 104 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.288-201ENST00000364854 92 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-281P-201ENST00000384212 103 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-541P-201ENST00000384709 110 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 MIR487A-201ENST00000385009 80 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 MRPL35P1-201ENST00000404272 572 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 MIR1302-6-201ENST00000408466 90 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AIMP1P2-201ENST00000425294 312 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AC104389.3-201ENST00000445629 235 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 snoU13.6-201ENST00000458785 104 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AC007215.1-201ENST00000464893 276 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 HMGB1P35-201ENST00000503360 598 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 RNA5SP54-201ENST00000516951 92 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-794P-201ENST00000517261 64 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 CYP4A27P-201ENST00000567218 190 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AC046143.2-201ENST00000609789 160 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 AC064859.1-201ENST00000624741 174 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
UBE3BQ7Z3V4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 SNORD115-46-201ENST00000390982 71 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 RNA5SP354-201ENST00000391247 136 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 SNORA3.2-201ENST00000408221 125 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 OOSP1P1-201ENST00000423265 274 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 AP001324.2-201ENST00000461163 319 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 RPS27P26-201ENST00000494583 239 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 RNA5SP24-201ENST00000516478 95 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 RN7SKP49-201ENST00000516675 260 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-826P-201ENST00000516827 104 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 RNU6-1271P-201ENST00000517049 105 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 AC093023.1-201ENST00000547375 507 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 Y_RNA.772-201ENST00000606692 102 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 AC002064.3-201ENST00000623448 346 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 U6.104-201ENST00000637979 90 ntBASIC3.04□□□□□ -1.92
UBE3BQ7Z3V4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.03□□□□□ -1.92
UBE3BQ7Z3V4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms