Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 RNA5SP323-201ENST00000391094 133 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL355143.1-201ENST00000407101 841 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 MIR548J-201ENST00000408833 112 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL356583.2-201ENST00000426536 280 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL596276.1-201ENST00000434465 418 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL512286.1-201ENST00000439244 400 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 TAF9P1-201ENST00000445421 515 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 TAF9P2-201ENST00000454958 515 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 HMGB1P29-201ENST00000505659 499 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 SNORD27.1-201ENST00000516319 72 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AC022878.1-201ENST00000530684 149 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 MIR4775-201ENST00000581168 75 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AC027807.2-201ENST00000616099 408 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 MIR6788-201ENST00000618842 66 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 U6.114-201ENST00000636407 96 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AC006927.3-201ENST00000638789 384 ntBASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HIST2H3AQ71DI3 AL442644.1-201ENST00000454390 3105 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 SNORD113-6-201ENST00000363345 75 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-266P-201ENST00000364225 107 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 MIR660-201ENST00000385235 97 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 SNORA16.2-201ENST00000390991 127 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 RN7SKP200-201ENST00000410564 320 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AL035398.1-201ENST00000430869 322 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC004386.2-201ENST00000441858 148 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 NFU1P2-201ENST00000448700 469 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC098869.1-201ENST00000481627 292 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 APOOP3-201ENST00000536787 586 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 MTCO3P23-201ENST00000561363 289 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AL391840.1-201ENST00000571144 367 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AC146944.4-201ENST00000602697 718 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 AL359697.1-201ENST00000624879 587 ntBASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-500P-201ENST00000362349 107 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU4-76P-201ENST00000364509 141 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 SNORA25.9-201ENST00000365087 128 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU5E-5P-201ENST00000365379 116 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-74P-201ENST00000384235 107 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 MIR454-201ENST00000390180 115 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU4-46P-201ENST00000410818 138 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 MTND3P17-201ENST00000416968 344 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC005002.2-201ENST00000438228 269 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC009237.7-201ENST00000447357 229 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AL009048.1-201ENST00000450437 298 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 USP9YP12-201ENST00000450481 570 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU7-21P-201ENST00000459430 62 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-410P-201ENST00000517006 107 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU2-46P-201ENST00000517038 113 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 RNU7-128P-201ENST00000517247 62 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC026470.2-201ENST00000561492 181 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AGGF1P4-201ENST00000568249 801 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST2H3AQ71DI3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-393P-201ENST00000384475 107 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-1127P-201ENST00000384580 107 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 MIR586-201ENST00000385035 97 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AL008987.1-201ENST00000415528 237 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AC245047.3-201ENST00000429428 127 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AP003072.2-201ENST00000527756 676 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 MIR5006-201ENST00000583027 110 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AC097065.2-201ENST00000608159 533 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 AC007671.2-201ENST00000637344 619 ntBASIC0.43□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-1029P-201ENST00000384109 107 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 SNORA75.2-201ENST00000391138 150 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 SNORA75.3-201ENST00000391231 150 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 RNU6-57P-201ENST00000411348 103 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 RPS26P42-201ENST00000413485 326 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 EPS15P1-201ENST00000448836 336 ntBASIC0.42□□□□□ -2.34
HIST2H3AQ71DI3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms