Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 RNU6-486P-201ENST00000363116 107 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 RNU6-674P-201ENST00000363831 107 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 RNU6-60P-201ENST00000364792 103 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 SNORD66.1-201ENST00000391230 76 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 PTMAP2-201ENST00000397627 327 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 MIR208B-201ENST00000401172 77 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 MIR1912-201ENST00000410389 80 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 MIR1911-201ENST00000410783 80 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 AL139281.1-201ENST00000422120 335 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 AL591419.1-201ENST00000427423 339 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 S100A11P1-201ENST00000477525 312 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 RNU6-240P-201ENST00000516098 97 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 SNORA31.16-201ENST00000516773 139 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 AC022655.2-201ENST00000577280 318 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 SNORD98-201ENST00000636377 67 ntBASIC4.59□□□□□ -1.67
TRAF7Q6Q0C0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.68
TRAF7Q6Q0C0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
TRAF7Q6Q0C0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
TRAF7Q6Q0C0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 RNA5SP124-201ENST00000362739 110 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 SNORA1.3-201ENST00000384676 136 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 MIR518C-201ENST00000384822 101 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 RPS26P2-201ENST00000440331 348 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 AC107294.3-201ENST00000609211 526 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 AC106871.1-201ENST00000568324 3102 ntBASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAF7Q6Q0C0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 U3.26-201ENST00000391236 204 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 PTMAP5-201ENST00000393073 333 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 RPL23AP46-201ENST00000438548 490 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 AL441985.1-201ENST00000457727 251 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 AIG1P1-201ENST00000503376 148 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 MIR3923-201ENST00000579521 83 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 MIR3129-201ENST00000581095 76 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 AC024220.1-201ENST00000603675 484 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 AC068254.2-201ENST00000623938 3577 ntBASIC4.57□□□□□ -1.68
TRAF7Q6Q0C0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 AC006971.1-201ENST00000407916 4486 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 SNORD87-201ENST00000364849 89 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 RNU6-1323P-201ENST00000384025 107 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 MIR23A-201ENST00000385245 73 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 RN7SKP156-201ENST00000410308 342 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 AL133547.1-201ENST00000448546 220 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 Y_RNA.666-201ENST00000516187 112 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 RNU2-58P-201ENST00000516403 183 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 MIR5685-201ENST00000579080 79 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 AL606490.9-201ENST00000603331 271 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 MIR6500-201ENST00000622700 86 ntBASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAF7Q6Q0C0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRAF7Q6Q0C0 AL161912.2-201ENST00000565707 3007 ntBASIC4.55□□□□□ -1.68
TRAF7Q6Q0C0 Y_RNA.205-201ENST00000364128 113 ntBASIC4.55□□□□□ -1.68
TRAF7Q6Q0C0 SNORA73.2-201ENST00000364946 201 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms