Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AF186996.7-201ENST00000492781 209 ntBASIC2.05□□□□□ -2.08
CTR9Q6PD62 AC116353.2-201ENST00000505332 712 ntBASIC2.05□□□□□ -2.08
CTR9Q6PD62 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.05□□□□□ -2.08
CTR9Q6PD62 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
CTR9Q6PD62 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
CTR9Q6PD62 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
CTR9Q6PD62 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.05□□□□□ -2.08
CTR9Q6PD62 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 Y_RNA.166-201ENST00000363730 102 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 RNU6-1059P-201ENST00000363752 98 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
CTR9Q6PD62 RNU6-968P-201ENST00000384076 107 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 RNU6-611P-201ENST00000384276 104 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 MIR548F5-201ENST00000408421 86 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 EDDM3CP-201ENST00000415977 425 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 RNU6-991P-201ENST00000516168 107 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.04□□□□□ -2.08
CTR9Q6PD62 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.04□□□□□ -2.08
CTR9Q6PD62 AC009994.1-201ENST00000606889 253 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 MIR6128-201ENST00000615528 109 ntBASIC2.04□□□□□ -2.08
CTR9Q6PD62 SNORD48-201ENST00000364953 64 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 SNORA17.3-201ENST00000391159 129 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 MIR208B-201ENST00000401172 77 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 AL139396.1-201ENST00000421137 167 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 USP9YP30-201ENST00000430729 455 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 SNORD13-201ENST00000459299 104 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 RPL23AP75-201ENST00000491601 451 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 HMGN1P12-201ENST00000499125 195 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC103851.1-201ENST00000506833 274 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 EIF4A1P12-201ENST00000551910 141 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC109446.1-201ENST00000566172 220 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 MIR4801-201ENST00000582704 82 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC010928.2-201ENST00000588017 287 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 RBM11P1-201ENST00000604951 799 ntBASIC2.03□□□□□ -2.08
CTR9Q6PD62 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CTR9Q6PD62 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CTR9Q6PD62 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CTR9Q6PD62 AC233981.2-201ENST00000611524 1614 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CTR9Q6PD62 U3.9-201ENST00000363823 204 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 Y_RNA.303-201ENST00000364998 94 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 SNORD81.2-201ENST00000365153 76 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 RNU6-596P-201ENST00000365395 98 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.02□□□□□ -2.09
CTR9Q6PD62 RNU6-842P-201ENST00000384269 107 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 RNU6-174P-201ENST00000410406 106 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 EIF4EP2-201ENST00000422816 654 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 HMGB1P18-201ENST00000438801 619 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 PRELID3BP1-201ENST00000457142 540 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 SNORD5.1-201ENST00000458800 75 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 FO393415.2-201ENST00000480085 343 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.02□□□□□ -2.09
CTR9Q6PD62 ACA59.1-201ENST00000515966 143 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 RNU1-54P-201ENST00000517181 120 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.02□□□□□ -2.09
CTR9Q6PD62 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.02□□□□□ -2.09
CTR9Q6PD62 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.02□□□□□ -2.09
CTR9Q6PD62 RNU6-743P-201ENST00000364151 106 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RNU4-42P-201ENST00000364738 142 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.01□□□□□ -2.09
CTR9Q6PD62 RNU6-26P-201ENST00000383985 107 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RNU6-997P-201ENST00000384725 107 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CTR9Q6PD62 MIR1262-201ENST00000408276 93 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RNA5SP494-201ENST00000410653 129 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RNU2-41P-201ENST00000410991 178 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RPS26P42-201ENST00000413485 326 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 AC074085.1-201ENST00000413598 418 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RPS3AP52-201ENST00000435639 297 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.01□□□□□ -2.09
CTR9Q6PD62 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 AC026782.1-201ENST00000512952 449 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 Y_RNA.691-201ENST00000516611 103 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 RNA5SP137-201ENST00000516833 135 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.01□□□□□ -2.09
CTR9Q6PD62 MIR3126-201ENST00000577443 74 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 MIR5696-201ENST00000578474 85 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.01□□□□□ -2.09
CTR9Q6PD62 AC243960.4-201ENST00000600532 288 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 SNRPGP17-201ENST00000603780 214 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.01□□□□□ -2.09
CTR9Q6PD62 ZNF72P-201ENST00000425869 1908 ntBASIC2.01□□□□□ -2.09
CTR9Q6PD62 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2□□□□□ -2.09
CTR9Q6PD62 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CTR9Q6PD62 Y_RNA.473-201ENST00000384333 102 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 RNU6-1093P-201ENST00000391194 107 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2□□□□□ -2.09
CTR9Q6PD62 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 AC096920.1-201ENST00000423991 241 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2□□□□□ -2.09
CTR9Q6PD62 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms