Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL356157.2-201ENST00000605122 111 ntBASIC1.17□□□□□ -2.22
H3F3CQ6NXT2 Y_RNA.123-201ENST00000363338 102 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 SNORD31B-201ENST00000364977 69 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 RNA5SP247-201ENST00000411181 105 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 USP9YP28-201ENST00000435142 589 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC099677.2-201ENST00000436385 175 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 RNU6-1037P-201ENST00000459571 107 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC010531.2-201ENST00000465012 153 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 HMGN1P7-201ENST00000491722 313 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC108078.1-201ENST00000508073 725 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC025465.4-201ENST00000513422 638 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 RNU6-567P-201ENST00000516746 107 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 DEFB131C-201ENST00000528817 165 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 MRPS36P4-201ENST00000534436 298 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 MIR3611-201ENST00000584484 83 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 MIR4424-201ENST00000585257 86 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC087683.1-201ENST00000591187 441 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 RMST_3.1-201ENST00000611651 109 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC022079.1-201ENST00000621546 602 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 AC005609.4-201ENST00000625071 447 ntBASIC1.16□□□□□ -2.22
H3F3CQ6NXT2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1103P-201ENST00000384150 107 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 MIR548B-201ENST00000385247 97 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 CDK8P2-201ENST00000415020 547 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 RPL30P7-201ENST00000479312 323 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 RNA5SP437-201ENST00000517249 129 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 MIR3941-201ENST00000582572 103 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
H3F3CQ6NXT2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 RNU6-227P-201ENST00000362865 103 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 RNU4-20P-201ENST00000365601 151 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 RNU6-38P-201ENST00000384085 107 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 SNORA29-201ENST00000384183 140 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 RNU6-331P-201ENST00000384724 107 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 ARL5AP1-201ENST00000418991 388 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 TIMM9P3-201ENST00000428659 274 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 MRPS10P2-201ENST00000431226 381 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 AC016717.1-201ENST00000448918 286 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 AC007395.1-201ENST00000451333 677 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 AC007547.1-201ENST00000462177 490 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 HMGB1P29-201ENST00000505659 499 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 CENPUP1-201ENST00000526649 1202 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 AC016727.2-201ENST00000603988 621 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 AC009994.1-201ENST00000606889 253 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 FER-210ENST00000628534 558 ntTSL 5 BASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 MIR6863-201ENST00000636112 90 ntBASIC1.14□□□□□ -2.23
H3F3CQ6NXT2 MTND5P35-201ENST00000557537 1720 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 RNU1-96P-201ENST00000364163 162 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 SNORA69-201ENST00000383895 132 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 MIR521-1-201ENST00000384902 87 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 RNA5SP494-201ENST00000410653 129 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AL161935.2-201ENST00000414627 60 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC016925.1-201ENST00000458303 298 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 RPL31P58-201ENST00000469001 379 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 SNORA40.12-201ENST00000516329 111 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1332P-201ENST00000516666 104 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC087854.1-201ENST00000519706 414 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 MIR5006-201ENST00000583027 110 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 MIR5692C1-201ENST00000585309 91 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC010620.1-201ENST00000601088 1102 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 MIR3976-201ENST00000606807 139 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC064807.4-201ENST00000607201 407 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC009509.4-201ENST00000619202 509 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AL158209.2-201ENST00000619266 216 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 AC068792.1-201ENST00000621354 417 ntBASIC1.13□□□□□ -2.23
H3F3CQ6NXT2 RNU1-76P-201ENST00000362903 159 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 Y_RNA.77-201ENST00000362962 107 ntBASIC1.12□□□□□ -2.23
H3F3CQ6NXT2 RNU6-1329P-201ENST00000365664 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms