Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 MIR4765-201ENST00000585007 77 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 SNORD11B-201ENST00000607707 90 ntBASIC3.34□□□□□ -1.87
E4F1Q66K89 AC026241.1-201ENST00000517873 2142 ntBASIC3.34□□□□□ -1.88
E4F1Q66K89 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
E4F1Q66K89 GABRG2-229ENST00000641017 3628 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.33□□□□□ -1.88
E4F1Q66K89 RNU6-1289P-201ENST00000384431 106 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.33□□□□□ -1.88
E4F1Q66K89 AC108043.1-201ENST00000512696 574 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 RNU2-44P-201ENST00000516795 194 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 DEFB131C-201ENST00000528817 165 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.33□□□□□ -1.88
E4F1Q66K89 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.33□□□□□ -1.88
E4F1Q66K89 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 U6.105-201ENST00000637379 88 ntBASIC3.33□□□□□ -1.88
E4F1Q66K89 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
E4F1Q66K89 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
E4F1Q66K89 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.32□□□□□ -1.88
E4F1Q66K89 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
E4F1Q66K89 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
E4F1Q66K89 RNU4-80P-201ENST00000363200 141 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 AL451074.5-201ENST00000415894 435 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
E4F1Q66K89 AC091179.1-201ENST00000461606 579 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 RPS29P26-201ENST00000477483 171 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 RPL31P41-201ENST00000477967 372 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.32□□□□□ -1.88
E4F1Q66K89 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.32□□□□□ -1.88
E4F1Q66K89 MRPS36P2-201ENST00000512569 299 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 AP002392.1-201ENST00000537692 208 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.32□□□□□ -1.88
E4F1Q66K89 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.32□□□□□ -1.88
E4F1Q66K89 AC005828.6-201ENST00000606610 232 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 UCA1.1-201ENST00000620952 75 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 AC090517.3-201ENST00000625170 141 ntBASIC3.32□□□□□ -1.88
E4F1Q66K89 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
E4F1Q66K89 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.32□□□□□ -1.88
E4F1Q66K89 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
E4F1Q66K89 UBE2WP1-201ENST00000362030 340 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RNU6-324P-201ENST00000363957 106 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RNY4P28-201ENST00000365281 93 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
E4F1Q66K89 SNORA7.4-201ENST00000384249 137 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RNU2-54P-201ENST00000410299 190 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RNA5SP274-201ENST00000410484 108 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.31□□□□□ -1.88
E4F1Q66K89 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.31□□□□□ -1.88
E4F1Q66K89 EIF4EP4-201ENST00000424916 578 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RPL21P10-201ENST00000463521 490 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.31□□□□□ -1.88
E4F1Q66K89 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
E4F1Q66K89 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.31□□□□□ -1.88
E4F1Q66K89 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.31□□□□□ -1.88
E4F1Q66K89 AC103810.1-201ENST00000579873 453 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 RPL30P11-203ENST00000598995 310 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 AC006380.1-201ENST00000603598 186 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 AC007318.2-201ENST00000620999 243 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 AC110079.1-202ENST00000635213 138 ntBASIC3.31□□□□□ -1.88
E4F1Q66K89 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
E4F1Q66K89 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
E4F1Q66K89 RNU6-1264P-201ENST00000383891 107 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 Y_RNA.638-201ENST00000459374 113 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 RN7SL863P-201ENST00000462370 296 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 AC107393.1-201ENST00000512403 346 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 RNU6-344P-201ENST00000516635 111 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 SNORD59.2-201ENST00000516873 68 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 DEFB117-201ENST00000602356 141 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
E4F1Q66K89 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.29□□□□□ -1.88
E4F1Q66K89 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
E4F1Q66K89 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
E4F1Q66K89 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
E4F1Q66K89 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 RNU6-1199P-201ENST00000411249 104 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 AC009963.1-201ENST00000417265 157 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.29□□□□□ -1.88
E4F1Q66K89 AC140059.1-201ENST00000489238 361 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 AC006445.1-201ENST00000491925 405 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.29□□□□□ -1.88
E4F1Q66K89 RAC1P5-201ENST00000512182 576 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 SCARNA17.1-201ENST00000516211 143 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 SCARNA17.2-201ENST00000516334 143 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 SNORA67.7-201ENST00000516664 135 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.29□□□□□ -1.88
E4F1Q66K89 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.29□□□□□ -1.88
E4F1Q66K89 CBX3P4-201ENST00000538909 354 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 Z83818.1-201ENST00000603584 150 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 SCARNA17.4-201ENST00000614296 143 ntBASIC3.29□□□□□ -1.88
E4F1Q66K89 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
E4F1Q66K89 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.82-201ENST00000363000 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.92-201ENST00000363043 102 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms