Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC092685.1-201ENST00000447960 1243 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 RNU7-94P-201ENST00000459576 63 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 MTND2P33-201ENST00000506452 1031 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 RNA5SP461-201ENST00000516451 104 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AL390208.1-201ENST00000605885 644 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AC021851.1-201ENST00000608537 1082 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 ZNF885P-201ENST00000420174 1098 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AC104629.2-201ENST00000468627 598 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AC008628.1-201ENST00000508663 265 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AC023632.1-201ENST00000518463 375 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AL162424.1-201ENST00000602325 221 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 MTND3P19-201ENST00000603825 345 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 AC034229.4-201ENST00000607861 441 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 SNORD38B-202ENST00000625943 69 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 MIR4275-201ENST00000636486 87 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 SEC63P2-201ENST00000503863 1939 ntBASIC-0.56□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AL121978.1-201ENST00000402778 359 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MTND1P30-201ENST00000441241 901 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AC079416.3-201ENST00000624479 549 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 ENSAP3-201ENST00000312710 333 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 RNU6-40P-201ENST00000384254 107 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 RNU6-57P-201ENST00000411348 103 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AC008267.5-201ENST00000424928 265 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 RNU6-581P-201ENST00000516214 105 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MIR6514-201ENST00000622549 70 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MIR873-201ENST00000401120 77 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 snoU13.30-201ENST00000458951 104 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 snoU13.27-201ENST00000459278 104 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AC021146.6-201ENST00000514659 117 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 BNIP3P6-201ENST00000549284 499 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MIR4499-201ENST00000584834 69 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AP000942.4-201ENST00000604811 241 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AC105081.1-201ENST00000617727 106 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AP000568.1-201ENST00000282964 442 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 RNU2-47P-201ENST00000410649 186 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MIR7844-201ENST00000616161 122 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MIR1246-201ENST00000636535 73 ntBASIC-0.57□□□□□ -2.5
VPS13DQ5THJ4 MIR101-2-201ENST00000362195 79 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 MIR148A-201ENST00000362215 68 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RNA5SP48-201ENST00000363969 126 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RNU6-98P-201ENST00000384173 107 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 SNORD111-201ENST00000408139 94 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RNU2-23P-201ENST00000410545 195 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 MTATP6P27-201ENST00000416987 621 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RPL21P38-201ENST00000418090 167 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 AC009237.7-201ENST00000447357 229 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RPL17P19-201ENST00000489069 552 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RNU2-46P-201ENST00000517038 113 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 MTCO3P41-201ENST00000414801 328 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 MTCO2P23-201ENST00000425216 680 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 RNU6-475P-201ENST00000516073 104 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 AC023827.1-201ENST00000569247 97 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 AC063943.3-201ENST00000615562 356 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 AL513423.1-201ENST00000621695 132 ntBASIC-0.58□□□□□ -2.5
VPS13DQ5THJ4 SNORD31B-201ENST00000364977 69 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 SKA2P1-201ENST00000425592 390 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AL627311.1-201ENST00000431514 115 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 MTCO2P7-201ENST00000446518 666 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC048346.1-201ENST00000510247 144 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC109445.1-201ENST00000512356 383 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 RNA5SP180-201ENST00000516181 101 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC106754.2-201ENST00000623006 233 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 RNA5SP467-201ENST00000391274 118 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 CCDC58P2-201ENST00000417131 366 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 SNRPEP8-201ENST00000442866 260 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 BTF3P15-201ENST00000455606 336 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 RN7SKP164-201ENST00000516138 266 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.59□□□□□ -2.5
VPS13DQ5THJ4 AL133217.1-201ENST00000450980 425 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms