Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 SNORA31.10-201ENST00000516482 106 ntBASIC-1.03□□□□□ -2.57
CCDC18Q5T9S5 AC023824.3-201ENST00000569003 562 ntBASIC-1.03□□□□□ -2.57
CCDC18Q5T9S5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.03□□□□□ -2.57
CCDC18Q5T9S5 AL390123.1-201ENST00000603216 237 ntBASIC-1.03□□□□□ -2.57
CCDC18Q5T9S5 MIR660-201ENST00000385235 97 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 RNU6-932P-201ENST00000391108 106 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 BX119904.4-201ENST00000424402 301 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 COX7BP2-201ENST00000437976 242 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 MTCO3P17-201ENST00000443775 513 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 RNU7-159P-201ENST00000459284 62 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 RNU6-714P-201ENST00000516963 103 ntBASIC-1.04□□□□□ -2.58
CCDC18Q5T9S5 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 PCNPP3-201ENST00000393579 471 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 MTCO3P43-201ENST00000440974 771 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 GXYLT1P1-201ENST00000446657 490 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 U8.21-201ENST00000459536 136 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 SNORA31.3-201ENST00000516029 96 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RNU6-917P-201ENST00000516294 104 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 AC023538.1-201ENST00000534576 736 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RNU6-252P-201ENST00000363232 107 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 SNORD31B-201ENST00000364977 69 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 SNORD116-20-201ENST00000384529 92 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RNU6-114P-201ENST00000384704 105 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RNU6-57P-201ENST00000411348 103 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RPL39P6-201ENST00000448289 150 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 TPT1P7-201ENST00000458300 517 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 LRRC34P1-201ENST00000542742 915 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 AC021231.3-201ENST00000558497 370 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 AC018889.1-201ENST00000605372 397 ntBASIC-1.05□□□□□ -2.58
CCDC18Q5T9S5 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 SNORD114-3-201ENST00000364969 75 ntBASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 RNU6-127P-201ENST00000390897 107 ntBASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 AL122001.1-201ENST00000457027 370 ntBASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.06□□□□□ -2.58
CCDC18Q5T9S5 MTND4P4-201ENST00000439033 1366 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 AL353997.1-201ENST00000432936 108 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 RNU6-856P-201ENST00000516959 98 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 MIR4778-201ENST00000577635 80 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 AL670379.3-201ENST00000605040 251 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 BCRP9-201ENST00000605312 388 ntBASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC18Q5T9S5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
CCDC18Q5T9S5 AC114755.3-201ENST00000481111 251 ntBASIC-1.08□□□□□ -2.58
CCDC18Q5T9S5 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.08□□□□□ -2.58
CCDC18Q5T9S5 RPL39P36-201ENST00000490784 156 ntBASIC-1.08□□□□□ -2.58
CCDC18Q5T9S5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1.08□□□□□ -2.58
CCDC18Q5T9S5 MIR3666-201ENST00000607845 111 ntBASIC-1.08□□□□□ -2.58
CCDC18Q5T9S5 RNU4-15P-201ENST00000362613 141 ntBASIC-1.09□□□□□ -2.58
CCDC18Q5T9S5 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.09□□□□□ -2.58
CCDC18Q5T9S5 Y_RNA.256-201ENST00000364594 104 ntBASIC-1.09□□□□□ -2.58
CCDC18Q5T9S5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.09□□□□□ -2.58
CCDC18Q5T9S5 MIR4637-201ENST00000582405 84 ntBASIC-1.09□□□□□ -2.58
CCDC18Q5T9S5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.09□□□□□ -2.58
CCDC18Q5T9S5 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 SNORA8.2-201ENST00000384372 139 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 AL136310.1-201ENST00000404926 654 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 ART2BP-201ENST00000453501 499 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 RNU7-165P-201ENST00000458864 60 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 RNU7-14P-201ENST00000459331 62 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 RNA5SP94-201ENST00000516917 108 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 AP002453.2-201ENST00000533503 320 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 AL606834.3-201ENST00000602615 496 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 AL136363.2-201ENST00000604173 851 ntBASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-1.1□□□□□ -2.59
CCDC18Q5T9S5 RNU6-269P-201ENST00000391077 97 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 MTCO2P31-201ENST00000402702 684 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 MIR548H2-201ENST00000408874 88 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 RNU4-46P-201ENST00000410818 138 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AC002542.1-201ENST00000440683 193 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AC091860.1-201ENST00000505723 432 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 AC024995.1-201ENST00000523014 93 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 MIR5697-201ENST00000578045 78 ntBASIC-1.11□□□□□ -2.59
CCDC18Q5T9S5 RNU6-97P-201ENST00000363387 104 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 SNORD113.3-201ENST00000364630 78 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 RNA5SP205-201ENST00000364653 136 ntBASIC-1.12□□□□□ -2.59
CCDC18Q5T9S5 Y_RNA.362-201ENST00000365518 110 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms