Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 RAB28P5-201ENST00000427490 651 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 AL445687.1-201ENST00000439946 251 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 HMGN1P18-201ENST00000457642 277 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 AL049873.1-201ENST00000480540 376 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 LARP7P3-201ENST00000579888 337 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
FNDC3BQ53EP0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.483-201ENST00000384380 101 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 MIR215-201ENST00000384858 110 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.618-201ENST00000410949 107 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 ELOCP21-201ENST00000412558 336 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AL390729.2-201ENST00000416137 156 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 Z82209.1-201ENST00000422141 2135 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AC104332.2-201ENST00000429959 156 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 SEPT14P8-201ENST00000508026 178 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AC018630.3-201ENST00000542637 96 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 EIF4BP1-201ENST00000554881 351 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 AC107871.2-201ENST00000612894 502 ntBASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
FNDC3BQ53EP0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 RNU6-743P-201ENST00000364151 106 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 RNU6-1175P-201ENST00000365200 107 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 MT-TW-201ENST00000387382 68 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 RNU2-25P-201ENST00000411041 191 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AC091826.1-201ENST00000514065 313 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AK6P2-201ENST00000549020 471 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 MIR4513-201ENST00000581077 86 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AC090616.3-201ENST00000582184 217 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 SNORD113-5-201ENST00000607261 78 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AC093732.2-201ENST00000607950 274 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AC062037.2-201ENST00000610137 73 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AL449363.1-201ENST00000617815 186 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 AL137790.1-201ENST00000634283 177 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 MIR3674-201ENST00000636576 68 ntBASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
FNDC3BQ53EP0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 RNU6-545P-201ENST00000362681 104 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 RNU4-90P-201ENST00000362773 141 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.84-201ENST00000363011 104 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 snoU2_19.2-201ENST00000363024 80 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 RNU6-438P-201ENST00000365561 103 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 AP002088.1-201ENST00000382740 395 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 SNORA54-201ENST00000384281 123 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 RNU6-472P-201ENST00000384299 107 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 SNORA44-201ENST00000384584 132 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 MIR561-201ENST00000385216 97 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 RNU4-30P-201ENST00000410245 143 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 AC009969.1-201ENST00000438726 172 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 SNORA48.11-201ENST00000517015 89 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 AC109329.2-201ENST00000519658 482 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 AC022616.8-201ENST00000533569 253 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 MIR4753-201ENST00000585119 83 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 AC006001.4-201ENST00000622243 395 ntBASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
FNDC3BQ53EP0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 RNU1-23P-201ENST00000363361 144 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 RNU6-1264P-201ENST00000383891 107 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 Y_RNA.570-201ENST00000384750 101 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 MIR95-201ENST00000385072 81 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 MIR300-201ENST00000401138 83 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 RPL23AP36-201ENST00000413895 458 ntBASIC3.12□□□□□ -1.91
FNDC3BQ53EP0 AC025750.2-201ENST00000442609 450 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms