| CRY2 | Q49AN0 | MIR597-201 | ENST00000384968 | 97 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC123900.1-201 | ENST00000420390 | 96 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | DAP3P1-201 | ENST00000441522 | 278 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MTCO2P30-201 | ENST00000503662 | 364 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | ATP5EP1-201 | ENST00000510257 | 156 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU6-864P-201 | ENST00000516256 | 108 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | DLGAP1-AS4-201 | ENST00000582054 | 757 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC243960.4-201 | ENST00000600532 | 288 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | uc_338.5-201 | ENST00000611839 | 155 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | U1.36-201 | ENST00000620684 | 176 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | LINC01515-217 | ENST00000620859 | 694 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | DUXAP9-208 | ENST00000622815 | 614 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC003984.1-201 | ENST00000450977 | 4104 nt | TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | ZNF736P3Y-201 | ENST00000428264 | 1465 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | Y_RNA.132-201 | ENST00000363421 | 102 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | Y_RNA.135-201 | ENST00000363439 | 95 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | SNORA18.2-201 | ENST00000383865 | 132 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MIR1283-2-201 | ENST00000408621 | 87 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RPL23AP6-201 | ENST00000446637 | 472 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | NDUFAF4P4-201 | ENST00000454883 | 502 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | TOMM22P6-201 | ENST00000465035 | 409 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC087477.1-201 | ENST00000465747 | 340 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RPS29P25-201 | ENST00000481709 | 171 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU2-44P-201 | ENST00000516795 | 194 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC104581.2-201 | ENST00000572227 | 430 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC006504.8-201 | ENST00000621046 | 635 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNA5SP493-201 | ENST00000364115 | 91 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU6-392P-201 | ENST00000364926 | 101 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | SNORD31B-201 | ENST00000364977 | 69 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU6-831P-201 | ENST00000384548 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MIR320B2-201 | ENST00000408479 | 138 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL158823.1-201 | ENST00000418441 | 478 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | WARS2P1-201 | ENST00000429678 | 537 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MTND2P29-201 | ENST00000438595 | 412 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL353689.1-201 | ENST00000438895 | 199 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | LINC01710-201 | ENST00000446002 | 390 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL035666.1-201 | ENST00000446195 | 348 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | OR2AQ1P-201 | ENST00000451972 | 200 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RPL23AP75-201 | ENST00000491601 | 451 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC082651.2-201 | ENST00000496833 | 166 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC063944.1-201 | ENST00000496943 | 295 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC026470.2-201 | ENST00000561492 | 181 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | LINC02555-201 | ENST00000563933 | 1951 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC005034.5-201 | ENST00000604219 | 466 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC005562.2-201 | ENST00000618264 | 111 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC018692.1-202 | ENST00000623559 | 676 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | Y_RNA.86-201 | ENST00000363020 | 111 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | TRAJ50-201 | ENST00000390487 | 60 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU6-510P-201 | ENST00000391239 | 108 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU6ATAC25P-201 | ENST00000408798 | 117 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RPS26P42-201 | ENST00000413485 | 326 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL359081.1-201 | ENST00000432083 | 615 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | LINC01594-201 | ENST00000445083 | 611 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL035415.1-201 | ENST00000447150 | 289 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | NFU1P2-201 | ENST00000448700 | 469 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RPL23AP3-201 | ENST00000453844 | 468 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | LINC02540-201 | ENST00000455554 | 570 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AF186996.7-201 | ENST00000492781 | 209 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | RNU6-566P-201 | ENST00000516790 | 107 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC100801.1-202 | ENST00000518266 | 371 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AF235103.2-201 | ENST00000525753 | 346 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC087441.2-201 | ENST00000529141 | 262 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL157688.1-201 | ENST00000555990 | 369 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | PTP4A1-204 | ENST00000578299 | 135 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AP001496.1-201 | ENST00000579113 | 471 nt | TSL 4 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MIR4273-201 | ENST00000582824 | 84 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MIR5006-201 | ENST00000583027 | 110 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC018638.8-201 | ENST00000588755 | 281 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | 7SK.7-201 | ENST00000603504 | 247 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AC016727.2-201 | ENST00000603988 | 621 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | TEX41-243 | ENST00000614173 | 190 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | U6atac.1-201 | ENST00000616025 | 117 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | AL590240.4-201 | ENST00000616908 | 390 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | GNPDA2-204 | ENST00000509756 | 5382 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MRPL42-202 | ENST00000393128 | 1983 nt | APPRIS ALT1 TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CRY2 | Q49AN0 | MGAT4C-207 | ENST00000552808 | 1937 nt | APPRIS P1 TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.796-201 | ENST00000364268 | 102 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.799-201 | ENST00000364992 | 102 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | NPS-201 | ENST00000398023 | 270 nt | APPRIS P1 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-1148P-201 | ENST00000410992 | 104 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | KRTAP25-1-201 | ENST00000416044 | 370 nt | APPRIS P1 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL139396.1-201 | ENST00000421137 | 167 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC139712.2-201 | ENST00000424302 | 339 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC004386.2-201 | ENST00000441858 | 148 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL138921.2-201 | ENST00000443919 | 578 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU4-49P-201 | ENST00000516080 | 140 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-1088P-201 | ENST00000516850 | 104 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU1-54P-201 | ENST00000517181 | 120 nt | BASIC | 2.02 | □□□□□ -2.09 | | |