Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 MTATP6P18-201ENST00000417994 673 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.87□□□□□ -2.27
ZNF404Q494X3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC004386.2-201ENST00000441858 148 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC016717.1-201ENST00000448918 286 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNU6-498P-201ENST00000459468 107 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC114982.1-201ENST00000469402 321 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNU6-948P-201ENST00000516374 107 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 RN7SKP88-201ENST00000516847 250 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNA5SP102-201ENST00000516865 106 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNU6-323P-201ENST00000521915 107 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 MTATP6P3-201ENST00000581686 676 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 MIR5006-201ENST00000583027 110 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC068790.2-201ENST00000602601 557 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC016727.2-201ENST00000603988 621 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC104458.1-201ENST00000608243 463 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 7SK.8-201ENST00000612110 250 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 7SK.11-201ENST00000615477 250 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 AC072046.2-201ENST00000618366 268 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 7SK.13-201ENST00000622040 250 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.87□□□□□ -2.27
ZNF404Q494X3 AL133216.2-202ENST00000634512 349 ntBASIC0.87□□□□□ -2.27
ZNF404Q494X3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.87□□□□□ -2.27
ZNF404Q494X3 RNU6-227P-201ENST00000362865 103 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 RNU6-975P-201ENST00000384296 105 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
ZNF404Q494X3 MTCYBP8-201ENST00000422855 651 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 MTCO2P11-201ENST00000431069 680 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 AL358934.1-201ENST00000432346 324 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 HMGN2P34-201ENST00000437647 269 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.86□□□□□ -2.27
ZNF404Q494X3 MTND1P27-201ENST00000451117 902 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 RNU6-1037P-201ENST00000459571 107 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 HMGN1P12-201ENST00000499125 195 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.86□□□□□ -2.27
ZNF404Q494X3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.86□□□□□ -2.27
ZNF404Q494X3 AL442163.3-201ENST00000554110 156 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 MIR3913-1-201ENST00000577744 102 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 uc_338.34-201ENST00000617467 174 ntBASIC0.86□□□□□ -2.27
ZNF404Q494X3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
ZNF404Q494X3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
ZNF404Q494X3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 SNORA29-201ENST00000384183 140 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 MIR549A-201ENST00000385268 96 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 RNA5SP219-201ENST00000390940 113 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 MIR1276-201ENST00000408707 83 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 RNA5SP494-201ENST00000410653 129 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.85□□□□□ -2.27
ZNF404Q494X3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.85□□□□□ -2.27
ZNF404Q494X3 PGBD4P5-201ENST00000445958 426 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 NFU1P2-201ENST00000448700 469 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.85□□□□□ -2.27
ZNF404Q494X3 RNU7-63P-201ENST00000459054 62 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 RNU7-180P-201ENST00000459240 63 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 RPS29P27-201ENST00000463711 170 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 RNU6-1146P-201ENST00000516282 102 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.85□□□□□ -2.27
ZNF404Q494X3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.85□□□□□ -2.27
ZNF404Q494X3 TCL6_2.1-201ENST00000615162 119 ntBASIC0.85□□□□□ -2.27
ZNF404Q494X3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
ZNF404Q494X3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AL356776.1-201ENST00000406574 447 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 RPS26P42-201ENST00000413485 326 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.84□□□□□ -2.27
ZNF404Q494X3 MTND3P9-201ENST00000429526 346 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC009237.7-201ENST00000447357 229 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC074290.1-201ENST00000448883 135 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC025465.4-201ENST00000513422 638 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 RNA5SP404-201ENST00000517118 132 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 CENPUP1-201ENST00000526649 1202 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.84□□□□□ -2.27
ZNF404Q494X3 AL391840.1-201ENST00000571144 367 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 MIR3664-201ENST00000579074 99 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 Z99497.2-201ENST00000603634 310 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC009509.4-201ENST00000619202 509 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AL603755.1-201ENST00000619504 163 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC006001.4-201ENST00000622243 395 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 AC091931.1-201ENST00000623488 728 ntBASIC0.84□□□□□ -2.27
ZNF404Q494X3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 SNORA25.9-201ENST00000365087 128 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 RNU6-996P-201ENST00000365438 107 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 RNU6-417P-201ENST00000384712 107 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 MIR1253-201ENST00000408273 105 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 MTCO3P8-201ENST00000453691 755 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 U8.21-201ENST00000459536 136 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 CCDC34P1-201ENST00000507441 517 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC010493.1-201ENST00000513479 292 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 555.1 ms