Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MTCO3P46-201ENST00000425787 232 ntBASIC1.36□□□□□ -2.19
RFX4Q33E94 AC114801.2-201ENST00000503825 781 ntBASIC1.36□□□□□ -2.19
RFX4Q33E94 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.36□□□□□ -2.19
RFX4Q33E94 SNORA59B-202ENST00000578183 701 ntBASIC1.36□□□□□ -2.19
RFX4Q33E94 FGF7P1-201ENST00000582820 288 ntBASIC1.36□□□□□ -2.19
RFX4Q33E94 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.36□□□□□ -2.19
RFX4Q33E94 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RFX4Q33E94 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.36□□□□□ -2.19
RFX4Q33E94 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.36□□□□□ -2.19
RFX4Q33E94 MTND5P9-201ENST00000503854 1755 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 CBX3P1-201ENST00000325243 554 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 Y_RNA.450-201ENST00000384198 113 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 Y_RNA.530-201ENST00000384587 101 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 CYCSP49-201ENST00000420810 319 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AL513185.2-201ENST00000425543 193 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 HMGB1P18-201ENST00000438801 619 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AC079354.2-201ENST00000453523 154 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AC010409.1-201ENST00000487382 476 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 RPS23P5-201ENST00000495419 428 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.35□□□□□ -2.19
RFX4Q33E94 MTCYBP18-201ENST00000501056 747 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.35□□□□□ -2.19
RFX4Q33E94 AC091435.1-201ENST00000505442 584 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 RNU6-256P-201ENST00000516747 97 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 MIR4298-201ENST00000584380 73 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 MIR3942-201ENST00000585264 109 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AC005786.1-201ENST00000588553 154 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 AC010900.2-201ENST00000604508 210 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.35□□□□□ -2.19
RFX4Q33E94 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.35□□□□□ -2.19
RFX4Q33E94 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.35□□□□□ -2.19
RFX4Q33E94 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RFX4Q33E94 Y_RNA.89-201ENST00000363031 102 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 Y_RNA.212-201ENST00000364177 102 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 Y_RNA.414-201ENST00000384011 101 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 RNU6-439P-201ENST00000384188 106 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
RFX4Q33E94 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
RFX4Q33E94 AC099677.2-201ENST00000436385 175 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 RPS29P25-201ENST00000481709 171 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 RPL23AP75-201ENST00000491601 451 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 AC097473.1-201ENST00000508142 408 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.34□□□□□ -2.19
RFX4Q33E94 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.34□□□□□ -2.19
RFX4Q33E94 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.34□□□□□ -2.19
RFX4Q33E94 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.34□□□□□ -2.19
RFX4Q33E94 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.34□□□□□ -2.19
RFX4Q33E94 AC023043.2-201ENST00000589678 1026 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 AC005562.2-201ENST00000618264 111 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.34□□□□□ -2.19
RFX4Q33E94 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.34□□□□□ -2.19
RFX4Q33E94 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
RFX4Q33E94 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RFX4Q33E94 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RFX4Q33E94 RNU6-562P-201ENST00000362731 107 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RNU6-534P-201ENST00000364877 106 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RNA5SP190-201ENST00000365222 118 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RNU4-12P-201ENST00000365233 139 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.33□□□□□ -2.2
RFX4Q33E94 U8.10-201ENST00000384260 133 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RNU6-933P-201ENST00000384424 107 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RFX4Q33E94 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.33□□□□□ -2.2
RFX4Q33E94 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.33□□□□□ -2.2
RFX4Q33E94 AC004386.2-201ENST00000441858 148 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 OR2AQ1P-201ENST00000451972 200 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 MTCO3P8-201ENST00000453691 755 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.33□□□□□ -2.2
RFX4Q33E94 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.33□□□□□ -2.2
RFX4Q33E94 AC087477.1-201ENST00000465747 340 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.33□□□□□ -2.2
RFX4Q33E94 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RPL17P51-201ENST00000605218 238 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 RMST_6.1-201ENST00000611980 203 ntBASIC1.33□□□□□ -2.2
RFX4Q33E94 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.33□□□□□ -2.2
RFX4Q33E94 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.33□□□□□ -2.2
RFX4Q33E94 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RFX4Q33E94 Y_RNA.9-201ENST00000362354 101 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 Y_RNA.100-201ENST00000363141 102 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 RNU6-418P-201ENST00000384035 107 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 RNU6-1026P-201ENST00000384465 108 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 MIR1283-1-201ENST00000408494 87 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 MIR548F1-201ENST00000408667 84 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.32□□□□□ -2.2
RFX4Q33E94 ZNF885P-201ENST00000420174 1098 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.32□□□□□ -2.2
RFX4Q33E94 Z82205.1-201ENST00000428456 297 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 Z82188.1-201ENST00000436709 154 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.32□□□□□ -2.2
RFX4Q33E94 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.32□□□□□ -2.2
RFX4Q33E94 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RFX4Q33E94 AC007395.1-201ENST00000451333 677 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AC007215.1-201ENST00000464893 276 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 SNORA31.17-201ENST00000516953 127 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 MTND1P5-201ENST00000517906 940 ntBASIC1.32□□□□□ -2.2
RFX4Q33E94 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
RFX4Q33E94 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms