Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 RNA5SP259-201ENST00000365541 109 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.84□□□□□ -2.27
SSX1Q16384 SNORA70.7-201ENST00000384159 133 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MIR515-2-201ENST00000384883 83 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MIR515-1-201ENST00000384884 83 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 RNA5SP219-201ENST00000390940 113 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AP1B1P2-201ENST00000416196 106 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MTND3P9-201ENST00000429526 346 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.84□□□□□ -2.27
SSX1Q16384 AC009237.7-201ENST00000447357 229 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MTND1P27-201ENST00000451117 902 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MTCO3P8-201ENST00000453691 755 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 RNU7-63P-201ENST00000459054 62 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 RNU7-34P-201ENST00000459394 64 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AC114982.1-201ENST00000469402 321 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 RNU7-40P-201ENST00000516397 64 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 RN7SKP88-201ENST00000516847 250 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MTCO2P4-201ENST00000517968 247 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.84□□□□□ -2.27
SSX1Q16384 MTND4P7-201ENST00000523876 130 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.84□□□□□ -2.27
SSX1Q16384 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.84□□□□□ -2.27
SSX1Q16384 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.84□□□□□ -2.27
SSX1Q16384 MIR4424-201ENST00000585257 86 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AP000907.4-201ENST00000604143 237 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AC109347.2-201ENST00000610220 349 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 7SK.8-201ENST00000612110 250 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 7SK.11-201ENST00000615477 250 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 7SK.13-201ENST00000622040 250 ntBASIC0.84□□□□□ -2.27
SSX1Q16384 AC068700.1-201ENST00000565862 3754 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SSX1Q16384 RNU6-1123P-201ENST00000362347 106 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 RNU6-1286P-201ENST00000383871 107 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 RNU6-417P-201ENST00000384712 107 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 MIR549A-201ENST00000385268 96 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 SNORA17.3-201ENST00000391159 129 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 RPL21P1-201ENST00000399532 476 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 RNA5SP494-201ENST00000410653 129 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.83□□□□□ -2.28
SSX1Q16384 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.83□□□□□ -2.28
SSX1Q16384 PGBD4P5-201ENST00000445958 426 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.83□□□□□ -2.28
SSX1Q16384 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
SSX1Q16384 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
SSX1Q16384 AC010493.1-201ENST00000513479 292 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 RNU6-1146P-201ENST00000516282 102 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 TPRKBP2-201ENST00000565969 475 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 AC040904.1-201ENST00000590850 223 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 Z99497.2-201ENST00000603634 310 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.83□□□□□ -2.28
SSX1Q16384 AC006001.4-201ENST00000622243 395 ntBASIC0.83□□□□□ -2.28
SSX1Q16384 AL391987.6-201ENST00000305671 199 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SSX1Q16384 MIR378A-201ENST00000362177 66 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 MIR586-201ENST00000385035 97 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 RNA5SP109-201ENST00000391010 116 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 RNA5SP467-201ENST00000391274 118 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC0.82□□□□□ -2.28
SSX1Q16384 AC092473.1-201ENST00000441098 221 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC007215.1-201ENST00000464893 276 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 RPS23P4-201ENST00000487908 423 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.82□□□□□ -2.28
SSX1Q16384 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 RNU6-1069P-201ENST00000516612 133 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC024995.1-201ENST00000523014 93 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.82□□□□□ -2.28
SSX1Q16384 MRPS36P4-201ENST00000534436 298 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
SSX1Q16384 AL929325.1-201ENST00000603096 117 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 RMST_3.1-201ENST00000611651 109 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC021506.2-201ENST00000612354 169 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.82□□□□□ -2.28
SSX1Q16384 AL391262.2-201ENST00000622466 494 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC139792.3-201ENST00000623525 224 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
SSX1Q16384 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.82□□□□□ -2.28
SSX1Q16384 RNU1-22P-201ENST00000363334 158 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 RNU6-1305P-201ENST00000364353 104 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 RNU6-1317P-201ENST00000364582 104 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 RNU6-968P-201ENST00000384076 107 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 SNORA25-201ENST00000384384 134 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 RNA5SP213-201ENST00000391031 106 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.81□□□□□ -2.28
SSX1Q16384 AL606517.2-201ENST00000442855 241 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 RPS27P1-201ENST00000450552 247 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.81□□□□□ -2.28
SSX1Q16384 MTCO2P18-201ENST00000457151 658 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 MTND3P7-201ENST00000474435 343 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.81□□□□□ -2.28
SSX1Q16384 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.81□□□□□ -2.28
SSX1Q16384 SUMO2P16-201ENST00000519475 264 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AC087854.1-201ENST00000519706 414 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.81□□□□□ -2.28
SSX1Q16384 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.81□□□□□ -2.28
SSX1Q16384 FGF7P1-201ENST00000582820 288 ntBASIC0.81□□□□□ -2.28
SSX1Q16384 AC004223.2-201ENST00000590309 544 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms