Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SNORA18.2-201ENST00000383865 132 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 SNORA69-201ENST00000383895 132 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 SNORD116-9-201ENST00000384000 95 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 SNORA29-201ENST00000384183 140 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 SNORD116-3-201ENST00000384287 95 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 SNORD116-7-201ENST00000384404 95 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 SNORD116-5-201ENST00000384462 95 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 USP9YP28-201ENST00000435142 589 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.22□□□□□ -2.21
CDH17Q12864 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.22□□□□□ -2.21
CDH17Q12864 AC007395.1-201ENST00000451333 677 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AC098826.2-201ENST00000452011 651 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AC091435.1-201ENST00000505442 584 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.22□□□□□ -2.21
CDH17Q12864 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.22□□□□□ -2.21
CDH17Q12864 AC084364.2-201ENST00000546924 395 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AC005668.1-201ENST00000571142 476 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 MTND1P15-201ENST00000579262 949 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AP005136.1-201ENST00000579765 429 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AC010620.1-201ENST00000601088 1102 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 CTHRC1P1-201ENST00000605383 469 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.22□□□□□ -2.21
CDH17Q12864 AL159152.1-201ENST00000635019 2587 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNU6-545P-201ENST00000362681 104 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNU5B-2P-201ENST00000363036 113 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 Y_RNA.118-201ENST00000363300 101 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 Y_RNA.167-201ENST00000363735 109 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNU6-1322P-201ENST00000364309 107 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNU6-1317P-201ENST00000364582 104 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 Y_RNA.269-201ENST00000364685 89 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 MIR520A-201ENST00000384862 85 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AP1B1P2-201ENST00000416196 106 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 C8orf59P1-201ENST00000429930 303 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.21□□□□□ -2.22
CDH17Q12864 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH17Q12864 ATP5J2P3-201ENST00000451550 258 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 snoU13.30-201ENST00000458951 104 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 SNORD60.2-201ENST00000516883 86 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNU6-835P-201ENST00000516974 104 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNA5SP437-201ENST00000517249 129 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH17Q12864 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH17Q12864 SCOCP1-201ENST00000554676 349 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH17Q12864 MIR3611-201ENST00000584484 83 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AL357078.3-201ENST00000607528 618 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 AC092807.2-201ENST00000609367 243 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDH17Q12864 MTND5P26-201ENST00000426018 1752 ntBASIC1.21□□□□□ -2.22
CDH17Q12864 RNU6-562P-201ENST00000362731 107 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 RNU6-862P-201ENST00000362804 105 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 RNU6-877P-201ENST00000383868 107 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH17Q12864 MTCO1P21-201ENST00000416634 589 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.2□□□□□ -2.22
CDH17Q12864 Z82205.1-201ENST00000428456 297 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 TIMM9P3-201ENST00000428659 274 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC245047.4-201ENST00000433189 144 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 HSPE1P9-201ENST00000440046 311 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC092473.1-201ENST00000441098 221 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 MTND3P16-201ENST00000452205 344 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 Y_RNA.654-201ENST00000497848 106 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.2□□□□□ -2.22
CDH17Q12864 AC091885.1-201ENST00000506658 268 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC092436.3-201ENST00000511788 257 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH17Q12864 AL157687.1-201ENST00000554853 619 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC069114.2-201ENST00000604699 304 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 AC100821.1-201ENST00000523153 2479 ntBASIC1.2□□□□□ -2.22
CDH17Q12864 MIR302D-201ENST00000362275 68 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 Y_RNA.132-201ENST00000363421 102 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 SNORA25.9-201ENST00000365087 128 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 RNU6-418P-201ENST00000384035 107 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 Y_RNA.481-201ENST00000384373 102 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 MIR548B-201ENST00000385247 97 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 AL117342.1-201ENST00000404861 406 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 RNU6-648P-201ENST00000410190 107 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH17Q12864 AL359672.1-201ENST00000442302 409 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 RNU6-1208P-201ENST00000459588 107 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 SRRM1P2-201ENST00000464531 1192 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 AC067942.3-201ENST00000512025 362 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 SNORA19.2-201ENST00000516013 114 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 RNU6-405P-201ENST00000516637 110 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.19□□□□□ -2.22
CDH17Q12864 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 AC016727.2-201ENST00000603988 621 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 AC245008.1-201ENST00000608123 476 ntBASIC1.19□□□□□ -2.22
CDH17Q12864 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms