Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 RNU6-1252P-201ENST00000363054 104 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 RNU6-254P-201ENST00000363377 107 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 SNORD113-7-201ENST00000363762 77 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 RNY3P3-201ENST00000363816 102 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 MIR487A-201ENST00000385009 80 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 MIR208B-201ENST00000401172 77 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 MIR450B-201ENST00000401182 78 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 AL357139.1-201ENST00000407792 426 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 AC012306.1-201ENST00000423267 114 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 SDAD1P3-201ENST00000427380 333 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 SNRPEP8-201ENST00000442866 260 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 RNU7-187P-201ENST00000458985 68 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 AC130509.1-201ENST00000464158 433 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.4□□□□□ -2.19
SMARCB1Q12824 EIF4A1P12-201ENST00000551910 141 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.4□□□□□ -2.19
SMARCB1Q12824 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.4□□□□□ -2.19
SMARCB1Q12824 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 U1.36-201ENST00000620684 176 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.4□□□□□ -2.19
SMARCB1Q12824 MIR1321-201ENST00000637766 79 ntBASIC1.4□□□□□ -2.19
SMARCB1Q12824 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SMARCB1Q12824 RNU1-76P-201ENST00000362903 159 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 RNU6-23P-201ENST00000363283 107 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 Y_RNA.123-201ENST00000363338 102 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 SNORA32.2-201ENST00000384049 122 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC004866.1-201ENST00000411748 78 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 AL590632.1-201ENST00000424289 371 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC139712.2-201ENST00000424302 339 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AL035666.1-201ENST00000446195 348 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC245102.2-201ENST00000448956 180 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AF186996.7-201ENST00000492781 209 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 RNU6-314P-201ENST00000516574 104 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 TPRKBP2-201ENST00000565969 475 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC090517.1-201ENST00000569307 266 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC016925.2-201ENST00000605108 242 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC004492.1-201ENST00000607036 742 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AL022345.1-201ENST00000607292 135 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC097065.2-201ENST00000608159 533 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 AC015540.1-201ENST00000615828 501 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
SMARCB1Q12824 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.39□□□□□ -2.19
SMARCB1Q12824 Y_RNA.3-201ENST00000362331 103 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 RNU4-56P-201ENST00000364700 142 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 SNORA18.2-201ENST00000383865 132 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 RNU6-160P-201ENST00000384591 107 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 SNORA48.1-201ENST00000390879 135 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AL590002.1-201ENST00000406554 418 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 RNA5SP100-201ENST00000410903 110 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 RNA5SP59-201ENST00000410922 110 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC123900.1-201ENST00000420390 96 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.38□□□□□ -2.19
SMARCB1Q12824 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.38□□□□□ -2.19
SMARCB1Q12824 MTCO3P18-201ENST00000440206 761 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC016925.1-201ENST00000458303 298 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 RNU7-14P-201ENST00000459331 62 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 RNA5SP57-201ENST00000459463 123 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC132942.1-201ENST00000486753 483 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC016957.1-201ENST00000534895 309 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC008269.2-201ENST00000561915 1105 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.38□□□□□ -2.19
SMARCB1Q12824 SNORA59B-202ENST00000578183 701 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC100830.2-201ENST00000581636 240 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC016727.2-201ENST00000603988 621 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 MIR3976-201ENST00000606807 139 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 DISC2.1-201ENST00000612827 205 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 AC024614.3-201ENST00000637860 256 ntBASIC1.38□□□□□ -2.19
SMARCB1Q12824 Y_RNA.164-201ENST00000363709 102 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 Y_RNA.373-201ENST00000365600 103 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 RNU6-1286P-201ENST00000383871 107 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 RNU6-338P-201ENST00000383888 105 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 SNORD116-4-201ENST00000384733 96 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 RNU6-1148P-201ENST00000410992 104 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 ARL5AP1-201ENST00000418991 388 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCB1Q12824 MTND1P11-201ENST00000456661 876 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AC010531.2-201ENST00000465012 153 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AC010409.1-201ENST00000487382 476 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCB1Q12824 ZNF519P2-201ENST00000557032 169 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.37□□□□□ -2.19
SMARCB1Q12824 EIF1P4-201ENST00000572664 335 ntBASIC1.37□□□□□ -2.19
SMARCB1Q12824 AC146944.4-201ENST00000602697 718 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms