Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU6-192P-201ENST00000391253 100 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
GABPAQ06546 EIF1P1-201ENST00000421436 341 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.82□□□□□ -2.12
GABPAQ06546 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.82□□□□□ -2.12
GABPAQ06546 SNORD53B-201ENST00000577887 78 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.82□□□□□ -2.12
GABPAQ06546 AC007014.2-201ENST00000615581 479 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 Y_RNA.157-201ENST00000363638 102 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 RNU6-784P-201ENST00000384330 106 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 RNU6-1026P-201ENST00000384465 108 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 RNU6-831P-201ENST00000384548 107 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 MIR517A-201ENST00000385001 87 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 AL512604.1-201ENST00000404812 257 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 MIR1277-201ENST00000408536 78 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 MTND1P4-201ENST00000435196 415 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 MTND4LP16-201ENST00000440828 295 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 TOMM22P6-201ENST00000465035 409 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 RPS29P25-201ENST00000481709 171 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.81□□□□□ -2.12
GABPAQ06546 SUB1P3-201ENST00000564581 315 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 AC002553.4-201ENST00000616896 331 ntBASIC1.81□□□□□ -2.12
GABPAQ06546 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
GABPAQ06546 RNU6-23P-201ENST00000363283 107 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 SNORD114-6-201ENST00000364393 72 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 SNORA18.2-201ENST00000383865 132 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RNU6-1013P-201ENST00000384180 107 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RNU6-160P-201ENST00000384591 107 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RNA5SP465-201ENST00000391195 109 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RNU6-174P-201ENST00000410406 106 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RNU6-1148P-201ENST00000410992 104 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AC123900.1-201ENST00000420390 96 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AL035666.1-201ENST00000446195 348 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.8□□□□□ -2.12
GABPAQ06546 RPL23AP3-201ENST00000453844 468 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 ACA59.1-201ENST00000515966 143 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RNU2-44P-201ENST00000516795 194 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.8□□□□□ -2.12
GABPAQ06546 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
GABPAQ06546 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.8□□□□□ -2.12
GABPAQ06546 AP003465.2-201ENST00000602571 373 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AC080078.2-201ENST00000603766 501 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 RPL17P51-201ENST00000605218 238 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AL512598.1-201ENST00000610158 273 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AC005296.1-201ENST00000616145 209 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AL590240.4-201ENST00000616908 390 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.8□□□□□ -2.12
GABPAQ06546 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.8□□□□□ -2.12
GABPAQ06546 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
GABPAQ06546 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
GABPAQ06546 SNORD50.1-201ENST00000362987 71 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 Y_RNA.135-201ENST00000363439 95 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 RNA5SP493-201ENST00000364115 91 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 MIR549A-201ENST00000385268 96 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
GABPAQ06546 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.79□□□□□ -2.12
GABPAQ06546 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.79□□□□□ -2.12
GABPAQ06546 AC087477.1-201ENST00000465747 340 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 RPL23AP75-201ENST00000491601 451 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.79□□□□□ -2.12
GABPAQ06546 MTCO2P30-201ENST00000503662 364 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 RNU6-1053P-201ENST00000515930 101 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 RNU6-864P-201ENST00000516256 108 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 RNU6-1088P-201ENST00000516850 104 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
GABPAQ06546 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.79□□□□□ -2.12
GABPAQ06546 AC015720.1-201ENST00000565251 277 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 AC016727.2-201ENST00000603988 621 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 CYP2C61P-201ENST00000604072 290 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 AC124303.1-201ENST00000605703 360 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
GABPAQ06546 AC008555.8-201ENST00000623602 2168 ntBASIC1.79□□□□□ -2.12
GABPAQ06546 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 Y_RNA.4-201ENST00000362333 112 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 Y_RNA.86-201ENST00000363020 111 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 SNORD31B-201ENST00000364977 69 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 SNORA12.2-201ENST00000391040 156 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 FGF7P8-201ENST00000402994 292 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 RNU6-321P-201ENST00000410912 106 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 RPL23AP6-201ENST00000446637 472 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 NFU1P2-201ENST00000448700 469 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.78□□□□□ -2.12
GABPAQ06546 PPP1R2P5-201ENST00000457256 603 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 AF186996.7-201ENST00000492781 209 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 AC108729.3-201ENST00000513484 108 ntBASIC1.78□□□□□ -2.12
GABPAQ06546 AP005639.2-201ENST00000527592 928 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms