Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC010531.2-201ENST00000465012 153 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 AC087477.1-201ENST00000465747 340 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.06□□□□□ -2.08
CALD1Q05682 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.06□□□□□ -2.08
CALD1Q05682 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.06□□□□□ -2.08
CALD1Q05682 SNORA59B-202ENST00000578183 701 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 MIR3942-201ENST00000585264 109 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 AC005562.2-201ENST00000618264 111 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CALD1Q05682 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.05□□□□□ -2.08
CALD1Q05682 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CALD1Q05682 RNU6-562P-201ENST00000362731 107 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 Y_RNA.212-201ENST00000364177 102 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 Y_RNA.295-201ENST00000364918 102 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 MIR517C-201ENST00000385103 95 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 MIR548F1-201ENST00000408667 84 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 RNU6-373P-201ENST00000411247 98 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 ZNF885P-201ENST00000420174 1098 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 PCMTD1P1-201ENST00000455560 355 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.05□□□□□ -2.08
CALD1Q05682 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 SNORD53B-201ENST00000577887 78 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 RPL17P51-201ENST00000605218 238 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.05□□□□□ -2.08
CALD1Q05682 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.05□□□□□ -2.08
CALD1Q05682 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 ZNF72P-201ENST00000425869 1908 ntBASIC2.05□□□□□ -2.08
CALD1Q05682 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.05□□□□□ -2.08
CALD1Q05682 CBX3P1-201ENST00000325243 554 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 SNORD50.1-201ENST00000362987 71 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 Y_RNA.100-201ENST00000363141 102 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 Y_RNA.135-201ENST00000363439 95 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 MIR517A-201ENST00000385001 87 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 RPS26P42-201ENST00000413485 326 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.04□□□□□ -2.08
CALD1Q05682 AC004386.2-201ENST00000441858 148 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.04□□□□□ -2.08
CALD1Q05682 AC097473.1-201ENST00000508142 408 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 RNU6-718P-201ENST00000516166 105 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 RNU6-1314P-201ENST00000517139 104 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 MTND1P5-201ENST00000517906 940 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.04□□□□□ -2.08
CALD1Q05682 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.04□□□□□ -2.08
CALD1Q05682 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.04□□□□□ -2.08
CALD1Q05682 MIR5006-201ENST00000583027 110 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CALD1Q05682 U4.5-201ENST00000617137 123 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 AL359757.2-201ENST00000624309 274 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.04□□□□□ -2.08
CALD1Q05682 MIR3662-201ENST00000637030 95 ntBASIC2.04□□□□□ -2.08
CALD1Q05682 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.03□□□□□ -2.08
CALD1Q05682 RN7SKP51-201ENST00000410781 304 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 RNU6-1148P-201ENST00000410992 104 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 AC004866.1-201ENST00000411748 78 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 MTCO1P44-201ENST00000441935 243 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 AL353572.1-201ENST00000442490 417 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 OR2AQ1P-201ENST00000451972 200 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 AC079354.2-201ENST00000453523 154 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 AC092989.1-201ENST00000481235 277 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 RPL23AP75-201ENST00000491601 451 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 MIR4713-201ENST00000582691 75 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 POLR3GP2-201ENST00000588366 668 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 AC005786.1-201ENST00000588553 154 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 AP000907.4-201ENST00000604143 237 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 MIR3688-2-201ENST00000636963 87 ntBASIC2.03□□□□□ -2.08
CALD1Q05682 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.02□□□□□ -2.09
CALD1Q05682 AP000648.3-201ENST00000623539 4507 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 Y_RNA.453-201ENST00000384223 109 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 RNU6-306P-201ENST00000384617 107 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.02□□□□□ -2.09
CALD1Q05682 HMGB1P18-201ENST00000438801 619 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 MTCO3P8-201ENST00000453691 755 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 MTCO2P30-201ENST00000503662 364 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 uc_338.5-201ENST00000611839 155 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 AC083806.3-201ENST00000614016 455 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 AC090517.2-201ENST00000614966 680 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 AC009033.1-201ENST00000624279 431 ntBASIC2.02□□□□□ -2.09
CALD1Q05682 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CALD1Q05682 AL159152.1-201ENST00000635019 2587 ntBASIC2.01□□□□□ -2.09
CALD1Q05682 RNU6-418P-201ENST00000384035 107 ntBASIC2.01□□□□□ -2.09
CALD1Q05682 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.01□□□□□ -2.09
CALD1Q05682 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.01□□□□□ -2.09
CALD1Q05682 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.01□□□□□ -2.09
CALD1Q05682 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.01□□□□□ -2.09
CALD1Q05682 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
CALD1Q05682 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.01□□□□□ -2.09
CALD1Q05682 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.01□□□□□ -2.09
CALD1Q05682 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CALD1Q05682 Y_RNA.132-201ENST00000363421 102 ntBASIC2□□□□□ -2.09
CALD1Q05682 Y_RNA.573-201ENST00000384763 105 ntBASIC2□□□□□ -2.09
CALD1Q05682 SNORA67.6-201ENST00000391093 99 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms