Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AC078938.1-201ENST00000620993 318 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 AC092634.7-201ENST00000621022 103 ntBASIC-0.23□□□□□ -2.45
HIST1H1AQ02539 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 RNU6-462P-201ENST00000362659 105 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 MIR520F-201ENST00000384824 87 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 MIR613-201ENST00000385248 95 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 MIR1253-201ENST00000408273 105 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AC019070.1-201ENST00000415008 1024 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AL031779.1-201ENST00000415663 330 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AL354692.1-201ENST00000423044 315 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 MTCO2P18-201ENST00000457151 658 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 SNORD111.1-201ENST00000516421 86 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AC078795.3-201ENST00000602913 472 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AC104458.1-201ENST00000608243 463 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AC245297.2-201ENST00000610119 565 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 AL359075.3-201ENST00000613288 217 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 U6.108-201ENST00000637764 58 ntBASIC-0.24□□□□□ -2.45
HIST1H1AQ02539 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 U3.4-201ENST00000363352 213 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 MIR1827-201ENST00000408549 66 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 AC016717.1-201ENST00000448918 286 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 MTCO3P10-201ENST00000455912 772 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 ADI1P3-201ENST00000549509 470 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 AC007014.2-201ENST00000615581 479 ntBASIC-0.25□□□□□ -2.45
HIST1H1AQ02539 AP000568.1-201ENST00000282964 442 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 RNU6-975P-201ENST00000384296 105 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 MIR489-201ENST00000384923 84 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 MIR518A1-201ENST00000385068 85 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 RNU6-994P-201ENST00000410507 111 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 SNORD71-201ENST00000411292 86 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 USP9YP11-201ENST00000427537 717 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 MTND1P20-201ENST00000430341 950 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 MTND1P32-201ENST00000433043 938 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 MTND4LP16-201ENST00000440828 295 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 AC064807.4-201ENST00000607201 407 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 AC090517.2-201ENST00000614966 680 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 AL136221.1-201ENST00000621449 509 ntBASIC-0.26□□□□□ -2.45
HIST1H1AQ02539 RNU4-41P-201ENST00000364426 143 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 RNU6-692P-201ENST00000384496 107 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 RNU6-293P-201ENST00000411259 106 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 CDK8P2-201ENST00000415020 547 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AL133396.1-201ENST00000432048 687 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 RPS25P9-201ENST00000435591 252 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AC010469.2-201ENST00000496412 480 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 RNU6-863P-201ENST00000515989 104 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 MIR3678-201ENST00000578455 94 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 MIR3192-201ENST00000584920 77 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AL596327.1-201ENST00000603629 213 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AP002802.2-201ENST00000605877 235 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 SNORA28-201ENST00000606769 126 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AC012409.4-201ENST00000612923 249 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AC015726.2-201ENST00000620112 122 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 AC006001.4-201ENST00000622243 395 ntBASIC-0.27□□□□□ -2.45
HIST1H1AQ02539 RNU6-552P-201ENST00000362869 119 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 SNORD32A-201ENST00000364805 84 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 MIR573-201ENST00000384964 99 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 RNU6-57P-201ENST00000411348 103 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC006366.1-201ENST00000422002 759 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC079382.1-201ENST00000493346 557 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC016632.1-201ENST00000503994 196 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC074133.1-201ENST00000515696 183 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 SNORA25.12-201ENST00000516202 82 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC026616.1-201ENST00000523157 525 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 MIR5692A1-201ENST00000580523 69 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 Z99497.2-201ENST00000603634 310 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AL158032.1-201ENST00000605401 106 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 Z99289.3-201ENST00000605586 594 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AC097478.2-201ENST00000610572 514 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 AP002782.1-201ENST00000623107 614 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 MIR6079-201ENST00000635807 62 ntBASIC-0.28□□□□□ -2.45
HIST1H1AQ02539 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 MIR18A-201ENST00000362310 71 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 RNU6V-201ENST00000384105 107 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 MIR549A-201ENST00000385268 96 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 SNORD111-201ENST00000408139 94 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AC005002.2-201ENST00000438228 269 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 AC116347.2-201ENST00000514912 523 ntBASIC-0.29□□□□□ -2.46
HIST1H1AQ02539 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms