Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 Y_RNA.576-201ENST00000384781 102 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 SNORA16.2-201ENST00000390991 127 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H3AP68431 AC005002.2-201ENST00000438228 269 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H3AP68431 SUB1P2-201ENST00000556401 297 ntBASIC0.25□□□□□ -2.37
HIST1H3AP68431 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H3AP68431 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
HIST1H3AP68431 Y_RNA.22-201ENST00000362492 102 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 RNU4-48P-201ENST00000365559 182 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 SNORD89-201ENST00000390981 114 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 MRPL42P2-201ENST00000403169 426 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.24□□□□□ -2.37
HIST1H3AP68431 NFU1P2-201ENST00000448700 469 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 RNA5SP220-201ENST00000516298 104 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HIST1H3AP68431 AC025627.3-201ENST00000582078 182 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 MIR5006-201ENST00000583027 110 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AC091805.2-201ENST00000603848 235 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AL031775.1-201ENST00000607014 887 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AL359075.3-201ENST00000613288 217 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AC022709.1-201ENST00000615967 87 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 AC005562.2-201ENST00000618264 111 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.24□□□□□ -2.37
HIST1H3AP68431 AL589743.1-201ENST00000551932 2712 ntBASIC0.24□□□□□ -2.37
HIST1H3AP68431 RNU6-533P-201ENST00000384144 107 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 SNORA12.1-201ENST00000390873 148 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 RNU1-119P-201ENST00000391122 165 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 RNU1-139P-201ENST00000391307 165 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 MRPL42P3-201ENST00000401492 326 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 MIR1287-201ENST00000408492 90 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 CDK8P2-201ENST00000415020 547 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AL117339.3-201ENST00000418733 162 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 RPS27AP14-201ENST00000422868 454 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H3AP68431 AC074290.1-201ENST00000448883 135 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H3AP68431 RNU6-1132P-201ENST00000459214 107 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H3AP68431 AC022493.2-201ENST00000506122 481 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 RNU6-1178P-201ENST00000516674 107 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AC105185.1-201ENST00000518705 535 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AP003181.2-201ENST00000528941 181 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H3AP68431 AC103996.1-201ENST00000555468 102 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AL078603.1-201ENST00000603824 313 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AC093913.1-201ENST00000614178 329 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 SNORA43.4-201ENST00000629559 138 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 U6.108-201ENST00000637764 58 ntBASIC0.23□□□□□ -2.37
HIST1H3AP68431 AP000568.1-201ENST00000282964 442 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 Y_RNA.238-201ENST00000364441 102 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.22□□□□□ -2.37
HIST1H3AP68431 SNORA36.2-201ENST00000384004 127 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 RNY1P14-201ENST00000384426 108 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
HIST1H3AP68431 RNU6-57P-201ENST00000411348 103 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 MTND1P20-201ENST00000430341 950 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.22□□□□□ -2.37
HIST1H3AP68431 AC004386.2-201ENST00000441858 148 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.22□□□□□ -2.37
HIST1H3AP68431 AC022364.2-201ENST00000457963 554 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 U7.7-201ENST00000459276 60 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 LRRC34P2-201ENST00000514850 553 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 RNU6-917P-201ENST00000516294 104 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 AP002001.1-203ENST00000534002 267 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.22□□□□□ -2.37
HIST1H3AP68431 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.22□□□□□ -2.37
HIST1H3AP68431 SNORA4-201ENST00000584302 138 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 AP001836.1-201ENST00000604675 523 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 PRELID3BP2-201ENST00000605362 201 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 RMST_2.1-201ENST00000617263 136 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 AC013437.2-201ENST00000639587 677 ntBASIC0.22□□□□□ -2.37
HIST1H3AP68431 MTND4P5-201ENST00000435821 1374 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 RNU4-68P-201ENST00000364314 141 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 RNU6-715P-201ENST00000365204 103 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 RNU6-827P-201ENST00000365553 106 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 SNORD115.1-201ENST00000391109 76 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 EXOSC3P1-201ENST00000448649 500 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC245047.8-201ENST00000456455 284 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 snoU13.6-201ENST00000458785 104 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC116562.3-201ENST00000506136 177 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 RNA5SP436-201ENST00000516020 115 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 SNORA70.12-201ENST00000516084 153 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 RN7SKP12-201ENST00000516275 143 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC027419.1-201ENST00000522976 328 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC068587.5-201ENST00000528506 175 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 AL121992.2-201ENST00000606262 256 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.21□□□□□ -2.38
HIST1H3AP68431 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.21□□□□□ -2.38
HIST1H3AP68431 Y_RNA.116-201ENST00000363292 103 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms