Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 U3.8-201ENST00000363675 217 ntBASIC0.48□□□□□ -2.33
SKP1P63208 RNU6-1060P-201ENST00000384664 107 ntBASIC0.48□□□□□ -2.33
SKP1P63208 MIR660-201ENST00000385235 97 ntBASIC0.48□□□□□ -2.33
SKP1P63208 MIR549A-201ENST00000385268 96 ntBASIC0.48□□□□□ -2.33
SKP1P63208 SNORD41-201ENST00000386967 70 ntBASIC0.48□□□□□ -2.33
SKP1P63208 RNA5SP467-201ENST00000391274 118 ntBASIC0.48□□□□□ -2.33
SKP1P63208 AL034345.1-201ENST00000407768 123 ntBASIC0.48□□□□□ -2.33
SKP1P63208 MTCO2P23-201ENST00000425216 680 ntBASIC0.48□□□□□ -2.33
SKP1P63208 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
SKP1P63208 AC016717.1-201ENST00000448918 286 ntBASIC0.48□□□□□ -2.33
SKP1P63208 RNU7-21P-201ENST00000459430 62 ntBASIC0.48□□□□□ -2.33
SKP1P63208 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SKP1P63208 Y_RNA.672-201ENST00000516289 104 ntBASIC0.48□□□□□ -2.33
SKP1P63208 SCARNA24.1-201ENST00000516465 137 ntBASIC0.48□□□□□ -2.33
SKP1P63208 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.48□□□□□ -2.33
SKP1P63208 Z99497.2-201ENST00000603634 310 ntBASIC0.48□□□□□ -2.33
SKP1P63208 AC022217.4-201ENST00000604389 163 ntBASIC0.48□□□□□ -2.33
SKP1P63208 RNU5F-6P-201ENST00000362979 116 ntBASIC0.47□□□□□ -2.33
SKP1P63208 RNU6-501P-201ENST00000364072 100 ntBASIC0.47□□□□□ -2.33
SKP1P63208 Y_RNA.796-201ENST00000364268 102 ntBASIC0.47□□□□□ -2.33
SKP1P63208 Y_RNA.799-201ENST00000364992 102 ntBASIC0.47□□□□□ -2.33
SKP1P63208 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
SKP1P63208 TIMM9P3-201ENST00000428659 274 ntBASIC0.47□□□□□ -2.33
SKP1P63208 NFU1P2-201ENST00000448700 469 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AL031274.1-201ENST00000450334 232 ntBASIC0.47□□□□□ -2.33
SKP1P63208 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.47□□□□□ -2.33
SKP1P63208 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
SKP1P63208 RPL39P39-201ENST00000455840 151 ntBASIC0.47□□□□□ -2.33
SKP1P63208 RNU7-90P-201ENST00000459216 62 ntBASIC0.47□□□□□ -2.33
SKP1P63208 MTCO2P6-201ENST00000463134 685 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC079382.1-201ENST00000493346 557 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC090049.2-201ENST00000550377 109 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC103996.1-201ENST00000555468 102 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AL162424.1-201ENST00000602325 221 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AP000811.1-201ENST00000603803 651 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC012557.2-201ENST00000605919 418 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AL359075.3-201ENST00000613288 217 ntBASIC0.47□□□□□ -2.33
SKP1P63208 TCL6_2.1-201ENST00000615162 119 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC009159.2-201ENST00000617603 606 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC073349.3-201ENST00000617616 186 ntBASIC0.47□□□□□ -2.33
SKP1P63208 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
SKP1P63208 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC006001.4-201ENST00000622243 395 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC106754.2-201ENST00000623006 233 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC011155.2-201ENST00000623202 216 ntBASIC0.47□□□□□ -2.33
SKP1P63208 AC022418.1-201ENST00000624118 445 ntBASIC0.47□□□□□ -2.33
SKP1P63208 RNU6-827P-201ENST00000365553 106 ntBASIC0.46□□□□□ -2.34
SKP1P63208 SNORA20.2-201ENST00000383922 131 ntBASIC0.46□□□□□ -2.34
SKP1P63208 AL356583.2-201ENST00000426536 280 ntBASIC0.46□□□□□ -2.34
SKP1P63208 AC113410.1-201ENST00000505029 247 ntBASIC0.46□□□□□ -2.34
SKP1P63208 SNORA70.12-201ENST00000516084 153 ntBASIC0.46□□□□□ -2.34
SKP1P63208 RNU6-1069P-201ENST00000516612 133 ntBASIC0.46□□□□□ -2.34
SKP1P63208 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.46□□□□□ -2.34
SKP1P63208 AC018714.1-201ENST00000605028 208 ntBASIC0.46□□□□□ -2.34
SKP1P63208 RNU4-5P-201ENST00000607255 135 ntBASIC0.46□□□□□ -2.34
SKP1P63208 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.46□□□□□ -2.34
SKP1P63208 AC022709.1-201ENST00000615967 87 ntBASIC0.46□□□□□ -2.34
SKP1P63208 AL603839.4-201ENST00000624658 1005 ntBASIC0.46□□□□□ -2.34
SKP1P63208 MTND4P5-201ENST00000435821 1374 ntBASIC0.45□□□□□ -2.34
SKP1P63208 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SKP1P63208 RNU6-1200P-201ENST00000384162 107 ntBASIC0.45□□□□□ -2.34
SKP1P63208 MIR586-201ENST00000385035 97 ntBASIC0.45□□□□□ -2.34
SKP1P63208 MRPL42P3-201ENST00000401492 326 ntBASIC0.45□□□□□ -2.34
SKP1P63208 AL451046.2-201ENST00000403074 277 ntBASIC0.45□□□□□ -2.34
SKP1P63208 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.45□□□□□ -2.34
SKP1P63208 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.45□□□□□ -2.34
SKP1P63208 RPEP5-201ENST00000441137 268 ntBASIC0.45□□□□□ -2.34
SKP1P63208 AC009237.7-201ENST00000447357 229 ntBASIC0.45□□□□□ -2.34
SKP1P63208 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.45□□□□□ -2.34
SKP1P63208 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.45□□□□□ -2.34
SKP1P63208 HMGB1P29-201ENST00000505659 499 ntBASIC0.45□□□□□ -2.34
SKP1P63208 AC004584.2-201ENST00000570407 410 ntBASIC0.45□□□□□ -2.34
SKP1P63208 AC080078.2-201ENST00000603766 501 ntBASIC0.45□□□□□ -2.34
SKP1P63208 AL049777.1-201ENST00000622740 518 ntBASIC0.45□□□□□ -2.34
SKP1P63208 U6.108-201ENST00000637764 58 ntBASIC0.45□□□□□ -2.34
SKP1P63208 RNU6-199P-201ENST00000362954 107 ntBASIC0.44□□□□□ -2.34
SKP1P63208 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
SKP1P63208 Y_RNA.354-201ENST00000365448 111 ntBASIC0.44□□□□□ -2.34
SKP1P63208 RNU4-46P-201ENST00000410818 138 ntBASIC0.44□□□□□ -2.34
SKP1P63208 RPS26P42-201ENST00000413485 326 ntBASIC0.44□□□□□ -2.34
SKP1P63208 MTND3P17-201ENST00000416968 344 ntBASIC0.44□□□□□ -2.34
SKP1P63208 AC245047.3-201ENST00000429428 127 ntBASIC0.44□□□□□ -2.34
SKP1P63208 AL035398.1-201ENST00000430869 322 ntBASIC0.44□□□□□ -2.34
SKP1P63208 AL365184.2-201ENST00000431139 435 ntBASIC0.44□□□□□ -2.34
SKP1P63208 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.44□□□□□ -2.34
SKP1P63208 RNU6-947P-201ENST00000516264 106 ntBASIC0.44□□□□□ -2.34
SKP1P63208 SNORA25.17-201ENST00000517184 124 ntBASIC0.44□□□□□ -2.34
SKP1P63208 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SKP1P63208 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.44□□□□□ -2.34
SKP1P63208 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.44□□□□□ -2.34
SKP1P63208 MIR5006-201ENST00000583027 110 ntBASIC0.44□□□□□ -2.34
SKP1P63208 AL512605.2-201ENST00000592972 256 ntBASIC0.44□□□□□ -2.34
SKP1P63208 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.44□□□□□ -2.34
SKP1P63208 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.44□□□□□ -2.34
SKP1P63208 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SKP1P63208 RNU6-169P-201ENST00000365336 107 ntBASIC0.43□□□□□ -2.34
SKP1P63208 SNORD116-13-201ENST00000384408 92 ntBASIC0.43□□□□□ -2.34
SKP1P63208 Y_RNA.508-201ENST00000384502 114 ntBASIC0.43□□□□□ -2.34
SKP1P63208 RNU6-440P-201ENST00000390882 105 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms