Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 RNA5SP470-201ENST00000516463 106 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 AC021231.3-201ENST00000558497 370 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 MIR548AD-201ENST00000584780 82 ntBASIC-1.8□□□□□ -2.7
RPL39P62891 RNA5SP467-201ENST00000391274 118 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 RPS20P2-201ENST00000402520 389 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 AL133264.1-201ENST00000407157 562 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.81□□□□□ -2.7
RPL39P62891 HMGN3P1-201ENST00000453847 193 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.81□□□□□ -2.7
RPL39P62891 RPS23P5-201ENST00000495419 428 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.81□□□□□ -2.7
RPL39P62891 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.81□□□□□ -2.7
RPL39P62891 MIR4306-201ENST00000583390 91 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 AC078795.2-201ENST00000602835 1252 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 AP002802.2-201ENST00000605877 235 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.81□□□□□ -2.7
RPL39P62891 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.81□□□□□ -2.7
RPL39P62891 FRG1KP-201ENST00000623592 341 ntBASIC-1.81□□□□□ -2.7
RPL39P62891 MIR101-2-201ENST00000362195 79 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 MIR501-201ENST00000390204 84 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 AC010154.1-201ENST00000425857 269 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 OR6C5P-201ENST00000452388 923 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 snoU13.14-201ENST00000459372 104 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.82□□□□□ -2.7
RPL39P62891 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.82□□□□□ -2.7
RPL39P62891 MTCO3P28-201ENST00000513351 515 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.82□□□□□ -2.7
RPL39P62891 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.82□□□□□ -2.7
RPL39P62891 AC006380.1-201ENST00000603598 186 ntBASIC-1.82□□□□□ -2.7
RPL39P62891 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.83□□□□□ -2.7
RPL39P62891 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 SNORA75.1-201ENST00000391130 148 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 AL355994.1-201ENST00000424379 260 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 MTND4P15-201ENST00000437913 1033 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 AC092170.1-201ENST00000440211 356 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 RNU6-1183P-201ENST00000517054 60 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 RNA5SP169-201ENST00000517268 117 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.83□□□□□ -2.7
RPL39P62891 SUMO2P14-201ENST00000604488 293 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 AC063943.3-201ENST00000615562 356 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.83□□□□□ -2.7
RPL39P62891 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 MTCO3P1-205ENST00000422088 832 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.84□□□□□ -2.7
RPL39P62891 SNRPEP8-201ENST00000442866 260 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 MTATP6P30-201ENST00000443540 664 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 C1DP5-201ENST00000525775 383 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 RNY1P9-201ENST00000532431 109 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 MIR4778-201ENST00000577635 80 ntBASIC-1.84□□□□□ -2.7
RPL39P62891 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.85□□□□□ -2.71
RPL39P62891 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.85□□□□□ -2.71
RPL39P62891 AC133485.4-201ENST00000561835 220 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 VN1R83P-201ENST00000595685 445 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 AC078795.3-201ENST00000602913 472 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 AC121334.2-201ENST00000605387 271 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 AL159972.1-201ENST00000625150 448 ntBASIC-1.85□□□□□ -2.71
RPL39P62891 RNU6-47P-201ENST00000383866 107 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 RNU6-31P-201ENST00000384388 108 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
RPL39P62891 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.86□□□□□ -2.71
RPL39P62891 AC011451.2-201ENST00000604303 598 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 AL390208.1-201ENST00000605885 644 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 AC007684.1-201ENST00000609671 477 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.86□□□□□ -2.71
RPL39P62891 AL450472.1-202ENST00000637286 180 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 AC093726.3-201ENST00000637588 150 ntBASIC-1.86□□□□□ -2.71
RPL39P62891 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.87□□□□□ -2.71
RPL39P62891 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.87□□□□□ -2.71
RPL39P62891 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.87□□□□□ -2.71
RPL39P62891 RN7SKP164-201ENST00000516138 266 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 RNA5SP67-201ENST00000516422 131 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 AC091163.3-201ENST00000518269 1144 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.87□□□□□ -2.71
RPL39P62891 MIR4804-201ENST00000581683 73 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 MIR3925-201ENST00000584674 77 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 MIR6507-201ENST00000613630 70 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 AC010809.3-201ENST00000621310 641 ntBASIC-1.87□□□□□ -2.71
RPL39P62891 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 SNORA2B-201ENST00000384583 137 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 MTCO3P41-201ENST00000414801 328 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 AC006366.1-201ENST00000422002 759 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.88□□□□□ -2.71
RPL39P62891 RNU6-63P-201ENST00000516690 95 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 LRRC6P1-201ENST00000532188 885 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.88□□□□□ -2.71
RPL39P62891 AL603758.1-201ENST00000618654 241 ntBASIC-1.88□□□□□ -2.71
RPL39P62891 AC099786.3-201ENST00000565735 1410 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms