Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-545P-201ENST00000362681 104 ntBASIC1.63□□□□□ -2.15
SRP54P61011 RNY3P3-201ENST00000363816 102 ntBASIC1.63□□□□□ -2.15
SRP54P61011 Y_RNA.372-201ENST00000365599 102 ntBASIC1.63□□□□□ -2.15
SRP54P61011 RNU6-296P-201ENST00000384608 107 ntBASIC1.63□□□□□ -2.15
SRP54P61011 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SRP54P61011 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.63□□□□□ -2.15
SRP54P61011 RN7SKP210-201ENST00000459176 261 ntBASIC1.63□□□□□ -2.15
SRP54P61011 AC007215.1-201ENST00000464893 276 ntBASIC1.63□□□□□ -2.15
SRP54P61011 AF186996.7-201ENST00000492781 209 ntBASIC1.63□□□□□ -2.15
SRP54P61011 AC025465.3-201ENST00000510570 311 ntBASIC1.63□□□□□ -2.15
SRP54P61011 RNU6-506P-201ENST00000516553 94 ntBASIC1.63□□□□□ -2.15
SRP54P61011 MIR4753-201ENST00000585119 83 ntBASIC1.63□□□□□ -2.15
SRP54P61011 AC146944.4-201ENST00000602697 718 ntBASIC1.63□□□□□ -2.15
SRP54P61011 CTHRC1P1-201ENST00000605383 469 ntBASIC1.63□□□□□ -2.15
SRP54P61011 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.63□□□□□ -2.15
SRP54P61011 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SRP54P61011 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.63□□□□□ -2.15
SRP54P61011 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.63□□□□□ -2.15
SRP54P61011 AC099654.12-201ENST00000639868 649 ntBASIC1.63□□□□□ -2.15
SRP54P61011 AC006026.1-201ENST00000444025 1803 ntBASIC1.63□□□□□ -2.15
SRP54P61011 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.63□□□□□ -2.15
SRP54P61011 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
SRP54P61011 RNU6-451P-201ENST00000362921 107 ntBASIC1.62□□□□□ -2.15
SRP54P61011 RNU6-877P-201ENST00000383868 107 ntBASIC1.62□□□□□ -2.15
SRP54P61011 U8.10-201ENST00000384260 133 ntBASIC1.62□□□□□ -2.15
SRP54P61011 Y_RNA.530-201ENST00000384587 101 ntBASIC1.62□□□□□ -2.15
SRP54P61011 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SRP54P61011 RPL21P111-201ENST00000418453 477 ntBASIC1.62□□□□□ -2.15
SRP54P61011 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.62□□□□□ -2.15
SRP54P61011 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.62□□□□□ -2.15
SRP54P61011 AC004386.2-201ENST00000441858 148 ntBASIC1.62□□□□□ -2.15
SRP54P61011 AC009237.7-201ENST00000447357 229 ntBASIC1.62□□□□□ -2.15
SRP54P61011 HMGN2P26-201ENST00000463169 339 ntBASIC1.62□□□□□ -2.15
SRP54P61011 AC114982.1-201ENST00000469402 321 ntBASIC1.62□□□□□ -2.15
SRP54P61011 AC245505.1-201ENST00000556398 224 ntBASIC1.62□□□□□ -2.15
SRP54P61011 MIR5006-201ENST00000583027 110 ntBASIC1.62□□□□□ -2.15
SRP54P61011 AL353149.1-201ENST00000610667 244 ntBASIC1.62□□□□□ -2.15
SRP54P61011 RMST_3.1-201ENST00000611651 109 ntBASIC1.62□□□□□ -2.15
SRP54P61011 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
SRP54P61011 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.62□□□□□ -2.15
SRP54P61011 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
SRP54P61011 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
SRP54P61011 MTND4P5-201ENST00000435821 1374 ntBASIC1.61□□□□□ -2.15
SRP54P61011 Y_RNA.256-201ENST00000364594 104 ntBASIC1.61□□□□□ -2.15
SRP54P61011 RNU6-338P-201ENST00000383888 105 ntBASIC1.61□□□□□ -2.15
SRP54P61011 RNU6-439P-201ENST00000384188 106 ntBASIC1.61□□□□□ -2.15
SRP54P61011 Y_RNA.517-201ENST00000384551 106 ntBASIC1.61□□□□□ -2.15
SRP54P61011 MIR520A-201ENST00000384862 85 ntBASIC1.61□□□□□ -2.15
SRP54P61011 EBAG9P1-201ENST00000418955 543 ntBASIC1.61□□□□□ -2.15
SRP54P61011 AC099677.2-201ENST00000436385 175 ntBASIC1.61□□□□□ -2.15
SRP54P61011 UBE2V1P8-201ENST00000437166 265 ntBASIC1.61□□□□□ -2.15
SRP54P61011 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
SRP54P61011 FAM206BP-201ENST00000510179 541 ntBASIC1.61□□□□□ -2.15
SRP54P61011 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
SRP54P61011 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
SRP54P61011 AP000907.4-201ENST00000604143 237 ntBASIC1.61□□□□□ -2.15
SRP54P61011 SNRPGP20-201ENST00000604477 205 ntBASIC1.61□□□□□ -2.15
SRP54P61011 AC080013.6-201ENST00000606185 215 ntBASIC1.61□□□□□ -2.15
SRP54P61011 MIR378A-201ENST00000362177 66 ntBASIC1.6□□□□□ -2.15
SRP54P61011 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
SRP54P61011 Y_RNA.338-201ENST00000365320 114 ntBASIC1.6□□□□□ -2.15
SRP54P61011 Y_RNA.373-201ENST00000365600 103 ntBASIC1.6□□□□□ -2.15
SRP54P61011 MIR181A1-201ENST00000385026 110 ntBASIC1.6□□□□□ -2.15
SRP54P61011 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SRP54P61011 AL590002.1-201ENST00000406554 418 ntBASIC1.6□□□□□ -2.15
SRP54P61011 MIR320B2-201ENST00000408479 138 ntBASIC1.6□□□□□ -2.15
SRP54P61011 Y_RNA.595-201ENST00000410403 105 ntBASIC1.6□□□□□ -2.15
SRP54P61011 Y_RNA.615-201ENST00000410769 117 ntBASIC1.6□□□□□ -2.15
SRP54P61011 HMGB1P18-201ENST00000438801 619 ntBASIC1.6□□□□□ -2.15
SRP54P61011 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.6□□□□□ -2.15
SRP54P61011 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP54P61011 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP54P61011 AC091435.1-201ENST00000505442 584 ntBASIC1.6□□□□□ -2.15
SRP54P61011 AC105313.1-201ENST00000509121 353 ntBASIC1.6□□□□□ -2.15
SRP54P61011 MTND1P35-201ENST00000526739 508 ntBASIC1.6□□□□□ -2.15
SRP54P61011 AC016957.1-201ENST00000534895 309 ntBASIC1.6□□□□□ -2.15
SRP54P61011 ZNF519P2-201ENST00000557032 169 ntBASIC1.6□□□□□ -2.15
SRP54P61011 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP54P61011 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
SRP54P61011 AC016925.2-201ENST00000605108 242 ntBASIC1.6□□□□□ -2.15
SRP54P61011 AC015540.1-201ENST00000615828 501 ntBASIC1.6□□□□□ -2.15
SRP54P61011 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.6□□□□□ -2.15
SRP54P61011 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.6□□□□□ -2.15
SRP54P61011 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SRP54P61011 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
SRP54P61011 MIR126-201ENST00000362291 85 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU6-862P-201ENST00000362804 105 ntBASIC1.59□□□□□ -2.15
SRP54P61011 Y_RNA.100-201ENST00000363141 102 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU6-1019P-201ENST00000364424 107 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU6-418P-201ENST00000384035 107 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU6-1235P-201ENST00000384559 107 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
SRP54P61011 ZNF885P-201ENST00000420174 1098 ntBASIC1.59□□□□□ -2.15
SRP54P61011 DAP3P1-201ENST00000441522 278 ntBASIC1.59□□□□□ -2.15
SRP54P61011 NFU1P2-201ENST00000448700 469 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU7-187P-201ENST00000458985 68 ntBASIC1.59□□□□□ -2.15
SRP54P61011 RNU6-498P-201ENST00000459468 107 ntBASIC1.59□□□□□ -2.15
SRP54P61011 HMGN1P13-201ENST00000505795 138 ntBASIC1.59□□□□□ -2.15
SRP54P61011 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.59□□□□□ -2.15
SRP54P61011 RNU6-948P-201ENST00000516374 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms