Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MIR4778-201ENST00000577635 80 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 MIR4714-201ENST00000580728 77 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AL162424.1-201ENST00000602325 221 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC136443.5-201ENST00000603741 370 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC097065.2-201ENST00000608159 533 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AL360219.1-201ENST00000610230 366 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC138749.5-201ENST00000611461 208 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.31□□□□□ -2.36
SPCS3P61009 TCL6_2.1-201ENST00000615162 119 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AC011155.2-201ENST00000623202 216 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 AL078595.3-201ENST00000623815 1166 ntBASIC0.31□□□□□ -2.36
SPCS3P61009 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
SPCS3P61009 RNU6-1287P-201ENST00000362914 107 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 Y_RNA.338-201ENST00000365320 114 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 Y_RNA.480-201ENST00000384364 102 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 RNU6-1060P-201ENST00000384664 107 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 SNORA16.2-201ENST00000390991 127 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 MTND3P17-201ENST00000416968 344 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 MTCO2P23-201ENST00000425216 680 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.3□□□□□ -2.36
SPCS3P61009 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.3□□□□□ -2.36
SPCS3P61009 AC005002.2-201ENST00000438228 269 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.3□□□□□ -2.36
SPCS3P61009 AC233266.1-201ENST00000454518 96 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC022364.2-201ENST00000457963 554 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 RNU6-917P-201ENST00000516294 104 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.3□□□□□ -2.36
SPCS3P61009 MTATP6P3-201ENST00000581686 676 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC242852.1-201ENST00000612151 96 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC009159.2-201ENST00000617603 606 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 AC244015.1-201ENST00000622301 99 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.3□□□□□ -2.36
SPCS3P61009 U6.114-201ENST00000636407 96 ntBASIC0.3□□□□□ -2.36
SPCS3P61009 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.3□□□□□ -2.36
SPCS3P61009 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SPCS3P61009 MIR337-201ENST00000362281 93 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.29□□□□□ -2.36
SPCS3P61009 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 RNU6-83P-201ENST00000384568 112 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 MIR586-201ENST00000385035 97 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SPCS3P61009 RNU6-57P-201ENST00000411348 103 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.29□□□□□ -2.36
SPCS3P61009 AC009237.7-201ENST00000447357 229 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 snoU13.6-201ENST00000458785 104 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 AC025465.4-201ENST00000513422 638 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.29□□□□□ -2.36
SPCS3P61009 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 RNU6-229P-201ENST00000516614 102 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 SNORA25.17-201ENST00000517184 124 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 AC025627.3-201ENST00000582078 182 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 AC009878.1-201ENST00000621819 340 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 AC022418.1-201ENST00000624118 445 ntBASIC0.29□□□□□ -2.36
SPCS3P61009 SNORA2.2-201ENST00000365473 135 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 SNORA20.2-201ENST00000383922 131 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.28□□□□□ -2.36
SPCS3P61009 CDK8P2-201ENST00000415020 547 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 AC245047.8-201ENST00000456455 284 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 U7.7-201ENST00000459276 60 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 RNU7-57P-201ENST00000459540 60 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 Y_RNA.672-201ENST00000516289 104 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 AP002001.1-203ENST00000534002 267 ntBASIC0.28□□□□□ -2.36
SPCS3P61009 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.28□□□□□ -2.36
SPCS3P61009 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.28□□□□□ -2.36
SPCS3P61009 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
SPCS3P61009 RNU6-1305P-201ENST00000364353 104 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 RNU6-169P-201ENST00000365336 107 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 RNU6-163P-201ENST00000384396 106 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AC004866.1-201ENST00000411748 78 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 ISCA1P6-201ENST00000427740 390 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AC084290.1-201ENST00000434995 374 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.27□□□□□ -2.37
SPCS3P61009 AC079140.5-201ENST00000507882 310 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 FABP5P5-201ENST00000515537 406 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 RN7SKP12-201ENST00000516275 143 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AC025647.1-201ENST00000517879 253 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AC016256.1-201ENST00000547971 354 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.27□□□□□ -2.37
SPCS3P61009 AL512605.2-201ENST00000592972 256 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.27□□□□□ -2.37
SPCS3P61009 AL442644.1-201ENST00000454390 3105 ntBASIC0.27□□□□□ -2.37
SPCS3P61009 AP000568.1-201ENST00000282964 442 ntBASIC0.26□□□□□ -2.37
SPCS3P61009 RNU5F-6P-201ENST00000362979 116 ntBASIC0.26□□□□□ -2.37
SPCS3P61009 RNU6-1240P-201ENST00000365155 104 ntBASIC0.26□□□□□ -2.37
SPCS3P61009 RNU6-1200P-201ENST00000384162 107 ntBASIC0.26□□□□□ -2.37
SPCS3P61009 AC008134.1-201ENST00000420943 193 ntBASIC0.26□□□□□ -2.37
SPCS3P61009 AL603825.1-201ENST00000438481 80 ntBASIC0.26□□□□□ -2.37
SPCS3P61009 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.26□□□□□ -2.37
SPCS3P61009 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.26□□□□□ -2.37
SPCS3P61009 AC027419.1-201ENST00000522976 328 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms