Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.56□□□□□ -1.84
RTP1P59025 RNU5F-8P-201ENST00000515941 111 ntBASIC3.56□□□□□ -1.84
RTP1P59025 CYCSP23-201ENST00000519781 313 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AC093331.1-201ENST00000521474 169 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AP005660.1-201ENST00000522972 293 ntBASIC3.56□□□□□ -1.84
RTP1P59025 MIR548AI-201ENST00000579940 88 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AC004467.1-201ENST00000615678 330 ntBASIC3.56□□□□□ -1.84
RTP1P59025 AL365265.1-201ENST00000621045 234 ntBASIC3.56□□□□□ -1.84
RTP1P59025 snoU18.1-201ENST00000629629 71 ntBASIC3.56□□□□□ -1.84
RTP1P59025 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.56□□□□□ -1.84
RTP1P59025 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.56□□□□□ -1.84
RTP1P59025 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTP1P59025 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RTP1P59025 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTP1P59025 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTP1P59025 RNU5F-3P-201ENST00000363767 117 ntBASIC3.55□□□□□ -1.84
RTP1P59025 RNU4-56P-201ENST00000364700 142 ntBASIC3.55□□□□□ -1.84
RTP1P59025 RNU6-211P-201ENST00000384047 107 ntBASIC3.55□□□□□ -1.84
RTP1P59025 Y_RNA.441-201ENST00000384123 112 ntBASIC3.55□□□□□ -1.84
RTP1P59025 Y_RNA.498-201ENST00000384460 102 ntBASIC3.55□□□□□ -1.84
RTP1P59025 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTP1P59025 ELOCP21-201ENST00000412558 336 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP1P59025 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.55□□□□□ -1.84
RTP1P59025 RPS27P29-201ENST00000463110 252 ntBASIC3.55□□□□□ -1.84
RTP1P59025 RPL23AP62-201ENST00000463396 453 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC091179.3-201ENST00000474761 144 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC090525.1-201ENST00000479116 478 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC108706.1-201ENST00000611053 297 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC091932.3-201ENST00000624223 323 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC000403.1-201ENST00000613696 3585 ntBASIC3.55□□□□□ -1.84
RTP1P59025 AC099654.7-201ENST00000635788 2127 ntBASIC3.55□□□□□ -1.84
RTP1P59025 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
RTP1P59025 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RTP1P59025 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RTP1P59025 RNU6-653P-201ENST00000363074 106 ntBASIC3.54□□□□□ -1.84
RTP1P59025 SNORA71.1-201ENST00000364523 117 ntBASIC3.54□□□□□ -1.84
RTP1P59025 RNU6-487P-201ENST00000365430 104 ntBASIC3.54□□□□□ -1.84
RTP1P59025 RNU6-81P-201ENST00000365608 104 ntBASIC3.54□□□□□ -1.84
RTP1P59025 AP000567.1-201ENST00000406413 156 ntBASIC3.54□□□□□ -1.84
RTP1P59025 RNA5SP293-201ENST00000410527 113 ntBASIC3.54□□□□□ -1.84
RTP1P59025 EEF1A1P41-201ENST00000414667 207 ntBASIC3.54□□□□□ -1.84
RTP1P59025 RAB28P5-201ENST00000427490 651 ntBASIC3.54□□□□□ -1.84
RTP1P59025 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.54□□□□□ -1.84
RTP1P59025 HMGN1P18-201ENST00000457642 277 ntBASIC3.54□□□□□ -1.84
RTP1P59025 AL121594.1-201ENST00000475906 575 ntBASIC3.54□□□□□ -1.84
RTP1P59025 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP1P59025 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP1P59025 MIR5692C2-201ENST00000577959 77 ntBASIC3.54□□□□□ -1.84
RTP1P59025 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP1P59025 AP001485.1-201ENST00000604799 199 ntBASIC3.54□□□□□ -1.84
RTP1P59025 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
RTP1P59025 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RTP1P59025 AL136360.1-201ENST00000503377 1900 ntBASIC3.54□□□□□ -1.84
RTP1P59025 AC092593.1-201ENST00000515413 1815 ntBASIC3.54□□□□□ -1.84
RTP1P59025 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RTP1P59025 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.53□□□□□ -1.84
RTP1P59025 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.53□□□□□ -1.84
RTP1P59025 RNU6-793P-201ENST00000384233 104 ntBASIC3.53□□□□□ -1.84
RTP1P59025 SNORA54-201ENST00000384281 123 ntBASIC3.53□□□□□ -1.84
RTP1P59025 AL512633.1-201ENST00000399931 655 ntBASIC3.53□□□□□ -1.84
RTP1P59025 RNU5E-9P-201ENST00000411164 104 ntBASIC3.53□□□□□ -1.84
RTP1P59025 AL451074.5-201ENST00000415894 435 ntBASIC3.53□□□□□ -1.84
RTP1P59025 AL139281.1-201ENST00000422120 335 ntBASIC3.53□□□□□ -1.84
RTP1P59025 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.53□□□□□ -1.84
RTP1P59025 RPS15AP5-201ENST00000436276 388 ntBASIC3.53□□□□□ -1.84
RTP1P59025 IFNA11P-201ENST00000446352 526 ntBASIC3.53□□□□□ -1.84
RTP1P59025 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.53□□□□□ -1.84
RTP1P59025 HMGB3P3-201ENST00000510526 400 ntBASIC3.53□□□□□ -1.84
RTP1P59025 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
RTP1P59025 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.53□□□□□ -1.84
RTP1P59025 AP002001.1-203ENST00000534002 267 ntBASIC3.53□□□□□ -1.84
RTP1P59025 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.53□□□□□ -1.84
RTP1P59025 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.53□□□□□ -1.84
RTP1P59025 uc_338.25-201ENST00000613756 156 ntBASIC3.53□□□□□ -1.84
RTP1P59025 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.53□□□□□ -1.84
RTP1P59025 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
RTP1P59025 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.52□□□□□ -1.85
RTP1P59025 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.52□□□□□ -1.85
RTP1P59025 AL136164.4-201ENST00000625013 2135 ntBASIC3.52□□□□□ -1.85
RTP1P59025 AL355596.1-201ENST00000565399 3996 ntBASIC3.52□□□□□ -1.85
RTP1P59025 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTP1P59025 AL357139.1-201ENST00000407792 426 ntBASIC3.52□□□□□ -1.85
RTP1P59025 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.52□□□□□ -1.85
RTP1P59025 AC006445.2-201ENST00000510061 472 ntBASIC3.52□□□□□ -1.85
RTP1P59025 RNU6-155P-201ENST00000516347 100 ntBASIC3.52□□□□□ -1.85
RTP1P59025 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.52□□□□□ -1.85
RTP1P59025 HMGN2P15-201ENST00000585707 270 ntBASIC3.52□□□□□ -1.85
RTP1P59025 DEFB117-201ENST00000602356 141 ntBASIC3.52□□□□□ -1.85
RTP1P59025 AL008718.3-201ENST00000610217 321 ntBASIC3.52□□□□□ -1.85
RTP1P59025 MIR622-201ENST00000638396 96 ntBASIC3.52□□□□□ -1.85
RTP1P59025 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.52□□□□□ -1.85
RTP1P59025 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTP1P59025 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.52□□□□□ -1.85
RTP1P59025 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RTP1P59025 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.51□□□□□ -1.85
RTP1P59025 AC002543.1-201ENST00000299783 1954 ntBASIC3.51□□□□□ -1.85
RTP1P59025 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.51□□□□□ -1.85
RTP1P59025 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTP1P59025 RNU6-727P-201ENST00000363592 107 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms