Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNU6-797P-201ENST00000363101 109 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 RNU1-23P-201ENST00000363361 144 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 RNU6-1210P-201ENST00000363775 107 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 RNU5E-7P-201ENST00000365290 117 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 RNU6-306P-201ENST00000384617 107 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.84□□□□□ -2.11
RIPK4P57078 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.84□□□□□ -2.11
RIPK4P57078 MTND3P23-201ENST00000431980 347 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.84□□□□□ -2.11
RIPK4P57078 AL031274.1-201ENST00000450334 232 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.84□□□□□ -2.11
RIPK4P57078 RNU6-586P-201ENST00000517265 104 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 RNU2-19P-201ENST00000517288 84 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.84□□□□□ -2.11
RIPK4P57078 AC034114.1-201ENST00000520293 285 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 TRAV32-201ENST00000553993 340 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 AC007792.1-201ENST00000623023 402 ntBASIC1.84□□□□□ -2.11
RIPK4P57078 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.84□□□□□ -2.11
RIPK4P57078 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RIPK4P57078 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RIPK4P57078 Y_RNA.67-201ENST00000362870 100 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 RNU6-1059P-201ENST00000363752 98 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 RNU6-336P-201ENST00000364891 107 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 Y_RNA.394-201ENST00000383942 103 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 SNORD116-29-201ENST00000384516 83 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 RNU2-48P-201ENST00000410694 191 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.83□□□□□ -2.12
RIPK4P57078 AC130509.1-201ENST00000464158 433 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 RNU1-92P-201ENST00000517017 135 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 RNU6-1213P-201ENST00000517075 94 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 AC087441.2-201ENST00000529141 262 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
RIPK4P57078 CPDP1-201ENST00000579660 283 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 MTND4LP32-201ENST00000636111 270 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 MIR1302-1-201ENST00000637932 143 ntBASIC1.83□□□□□ -2.12
RIPK4P57078 SNORD56.1-201ENST00000362913 68 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 RNU6-1317P-201ENST00000364582 104 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 Y_RNA.419-201ENST00000384041 102 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 RNU6-1032P-201ENST00000384100 107 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 RNU6-1013P-201ENST00000384180 107 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AL512604.1-201ENST00000404812 257 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 USP9YP30-201ENST00000430729 455 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.82□□□□□ -2.12
RIPK4P57078 Y_RNA.632-201ENST00000459189 102 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.82□□□□□ -2.12
RIPK4P57078 RPL30P1-201ENST00000488676 339 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC079140.5-201ENST00000507882 310 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 PTP4A1P4-201ENST00000512479 322 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC069113.1-201ENST00000517763 267 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.82□□□□□ -2.12
RIPK4P57078 APOOP3-201ENST00000536787 586 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC018630.3-201ENST00000542637 96 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC005668.1-201ENST00000571142 476 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 MIR3126-201ENST00000577443 74 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 MIR4421-201ENST00000578133 69 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC005034.5-201ENST00000604219 466 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AL022345.1-201ENST00000607292 135 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC022140.2-201ENST00000623500 188 ntBASIC1.82□□□□□ -2.12
RIPK4P57078 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RIPK4P57078 AC008555.8-201ENST00000623602 2168 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-105P-201ENST00000363909 104 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-694P-201ENST00000364071 147 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 Y_RNA.813-201ENST00000364639 102 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-128P-201ENST00000383976 107 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 Y_RNA.404-201ENST00000383978 102 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-214P-201ENST00000384130 107 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-842P-201ENST00000384269 107 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-692P-201ENST00000384496 107 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RIPK4P57078 HMGN2P39-201ENST00000398005 273 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RPS29P13-201ENST00000402041 169 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-325P-201ENST00000411132 105 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 AC074085.1-201ENST00000413598 418 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 UBE2V1P4-201ENST00000425374 344 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 Z82205.1-201ENST00000428456 297 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 SNAP23P1-201ENST00000433229 246 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 AC243964.1-201ENST00000441814 261 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
RIPK4P57078 RPS29P27-201ENST00000463711 170 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 AC026782.1-201ENST00000512952 449 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-377P-201ENST00000515965 102 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 Y_RNA.670-201ENST00000516255 105 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 RNA5SP61-201ENST00000516453 100 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 SUB1P3-201ENST00000564581 315 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.81□□□□□ -2.12
RIPK4P57078 FRG2DP-202ENST00000566967 323 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 MIR4529-201ENST00000578110 78 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 AC113139.1-201ENST00000605049 239 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 MIR3976-201ENST00000606807 139 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 MIR6128-201ENST00000615528 109 ntBASIC1.81□□□□□ -2.12
RIPK4P57078 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.81□□□□□ -2.12
RIPK4P57078 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.8□□□□□ -2.12
RIPK4P57078 RNU6-1274P-201ENST00000384557 107 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RIPK4P57078 RNU6-293P-201ENST00000411259 106 ntBASIC1.8□□□□□ -2.12
RIPK4P57078 RPL37P10-201ENST00000412884 288 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms