Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 OR2AQ1P-201ENST00000451972 200 ntBASIC1.85□□□□□ -2.11
PEX3P56589 PRELID3BP1-201ENST00000457142 540 ntBASIC1.85□□□□□ -2.11
PEX3P56589 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
PEX3P56589 AC103851.1-201ENST00000506833 274 ntBASIC1.85□□□□□ -2.11
PEX3P56589 RNU6-1016P-201ENST00000516689 94 ntBASIC1.85□□□□□ -2.11
PEX3P56589 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.85□□□□□ -2.11
PEX3P56589 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.85□□□□□ -2.11
PEX3P56589 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
PEX3P56589 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
PEX3P56589 AC010928.2-201ENST00000588017 287 ntBASIC1.85□□□□□ -2.11
PEX3P56589 SNRPGP17-201ENST00000603780 214 ntBASIC1.85□□□□□ -2.11
PEX3P56589 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
PEX3P56589 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.85□□□□□ -2.11
PEX3P56589 AL359314.1-201ENST00000616913 261 ntBASIC1.85□□□□□ -2.11
PEX3P56589 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.85□□□□□ -2.11
PEX3P56589 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PEX3P56589 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PEX3P56589 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.11
PEX3P56589 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
PEX3P56589 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PEX3P56589 SNORA16B-201ENST00000364674 135 ntBASIC1.84□□□□□ -2.11
PEX3P56589 RNU6-234P-201ENST00000365229 104 ntBASIC1.84□□□□□ -2.11
PEX3P56589 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.84□□□□□ -2.11
PEX3P56589 Y_RNA.474-201ENST00000384341 102 ntBASIC1.84□□□□□ -2.11
PEX3P56589 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PEX3P56589 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
PEX3P56589 MIR208B-201ENST00000401172 77 ntBASIC1.84□□□□□ -2.11
PEX3P56589 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.84□□□□□ -2.11
PEX3P56589 AL590556.1-201ENST00000423231 483 ntBASIC1.84□□□□□ -2.11
PEX3P56589 Z82205.1-201ENST00000428456 297 ntBASIC1.84□□□□□ -2.11
PEX3P56589 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.84□□□□□ -2.11
PEX3P56589 AC007215.1-201ENST00000464893 276 ntBASIC1.84□□□□□ -2.11
PEX3P56589 AC087477.1-201ENST00000465747 340 ntBASIC1.84□□□□□ -2.11
PEX3P56589 AC132942.1-201ENST00000486753 483 ntBASIC1.84□□□□□ -2.11
PEX3P56589 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.84□□□□□ -2.11
PEX3P56589 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
PEX3P56589 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.84□□□□□ -2.11
PEX3P56589 ACA59.1-201ENST00000515966 143 ntBASIC1.84□□□□□ -2.11
PEX3P56589 MIR449C-201ENST00000516047 92 ntBASIC1.84□□□□□ -2.11
PEX3P56589 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.84□□□□□ -2.11
PEX3P56589 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.84□□□□□ -2.11
PEX3P56589 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
PEX3P56589 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.84□□□□□ -2.11
PEX3P56589 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
PEX3P56589 uc_338.5-201ENST00000611839 155 ntBASIC1.84□□□□□ -2.11
PEX3P56589 AL355073.2-201ENST00000612106 557 ntBASIC1.84□□□□□ -2.11
PEX3P56589 MIR6128-201ENST00000615528 109 ntBASIC1.84□□□□□ -2.11
PEX3P56589 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.84□□□□□ -2.11
PEX3P56589 MTND5P9-201ENST00000503854 1755 ntBASIC1.84□□□□□ -2.12
PEX3P56589 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PEX3P56589 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.84□□□□□ -2.12
PEX3P56589 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.83□□□□□ -2.12
PEX3P56589 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
PEX3P56589 SNORD115-8-201ENST00000363856 82 ntBASIC1.83□□□□□ -2.12
PEX3P56589 SNORD115-32-201ENST00000364079 82 ntBASIC1.83□□□□□ -2.12
PEX3P56589 SNORD115-38-201ENST00000365037 82 ntBASIC1.83□□□□□ -2.12
PEX3P56589 RNU6-26P-201ENST00000383985 107 ntBASIC1.83□□□□□ -2.12
PEX3P56589 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PEX3P56589 AL356432.1-201ENST00000405809 419 ntBASIC1.83□□□□□ -2.12
PEX3P56589 RNA5SP494-201ENST00000410653 129 ntBASIC1.83□□□□□ -2.12
PEX3P56589 RNU2-41P-201ENST00000410991 178 ntBASIC1.83□□□□□ -2.12
PEX3P56589 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
PEX3P56589 SRIP3-201ENST00000413200 219 ntBASIC1.83□□□□□ -2.12
PEX3P56589 AC074085.1-201ENST00000413598 418 ntBASIC1.83□□□□□ -2.12
PEX3P56589 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
PEX3P56589 Z82188.1-201ENST00000436709 154 ntBASIC1.83□□□□□ -2.12
PEX3P56589 AC098614.3-201ENST00000438957 440 ntBASIC1.83□□□□□ -2.12
PEX3P56589 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.83□□□□□ -2.12
PEX3P56589 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.83□□□□□ -2.12
PEX3P56589 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.83□□□□□ -2.12
PEX3P56589 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
PEX3P56589 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.83□□□□□ -2.12
PEX3P56589 AL117351.2-201ENST00000513571 157 ntBASIC1.83□□□□□ -2.12
PEX3P56589 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.83□□□□□ -2.12
PEX3P56589 TPTEP1-208ENST00000636884 213 ntBASIC1.83□□□□□ -2.12
PEX3P56589 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PEX3P56589 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PEX3P56589 MIR340-201ENST00000362125 95 ntBASIC1.82□□□□□ -2.12
PEX3P56589 RNU6-1164P-201ENST00000364428 107 ntBASIC1.82□□□□□ -2.12
PEX3P56589 Y_RNA.332-201ENST00000365271 113 ntBASIC1.82□□□□□ -2.12
PEX3P56589 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PEX3P56589 MIR487A-201ENST00000385009 80 ntBASIC1.82□□□□□ -2.12
PEX3P56589 RNA5SP213-201ENST00000391031 106 ntBASIC1.82□□□□□ -2.12
PEX3P56589 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
PEX3P56589 RNU4-14P-201ENST00000410858 122 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AC004866.1-201ENST00000411748 78 ntBASIC1.82□□□□□ -2.12
PEX3P56589 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.82□□□□□ -2.12
PEX3P56589 AL137159.1-201ENST00000452808 512 ntBASIC1.82□□□□□ -2.12
PEX3P56589 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.82□□□□□ -2.12
PEX3P56589 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.82□□□□□ -2.12
PEX3P56589 FO393415.2-201ENST00000480085 343 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AC107032.1-201ENST00000485945 480 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AC093259.1-201ENST00000509755 300 ntBASIC1.82□□□□□ -2.12
PEX3P56589 Y_RNA.670-201ENST00000516255 105 ntBASIC1.82□□□□□ -2.12
PEX3P56589 RNU1-54P-201ENST00000517181 120 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.82□□□□□ -2.12
PEX3P56589 AC109446.1-201ENST00000566172 220 ntBASIC1.82□□□□□ -2.12
PEX3P56589 MIR4255-201ENST00000579351 72 ntBASIC1.82□□□□□ -2.12
PEX3P56589 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms