Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RNA5SP494-201ENST00000410653 129 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC108667.1-201ENST00000428618 249 ntBASIC1.02□□□□□ -2.25
CMC4P56277 MTND3P9-201ENST00000429526 346 ntBASIC1.02□□□□□ -2.25
CMC4P56277 MTND4P5-201ENST00000435821 1374 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.02□□□□□ -2.25
CMC4P56277 MTND1P26-201ENST00000440488 538 ntBASIC1.02□□□□□ -2.25
CMC4P56277 OR2AQ1P-201ENST00000451972 200 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC114982.1-201ENST00000469402 321 ntBASIC1.02□□□□□ -2.25
CMC4P56277 RPS26P55-201ENST00000471178 356 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AL163540.1-201ENST00000485382 386 ntBASIC1.02□□□□□ -2.25
CMC4P56277 MTCO1P29-201ENST00000496868 288 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CMC4P56277 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC092436.3-201ENST00000511788 257 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.02□□□□□ -2.25
CMC4P56277 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.02□□□□□ -2.25
CMC4P56277 AC025423.5-201ENST00000550230 219 ntBASIC1.02□□□□□ -2.25
CMC4P56277 MTND3P12-201ENST00000559068 328 ntBASIC1.02□□□□□ -2.25
CMC4P56277 HMGB1P33-201ENST00000563485 527 ntBASIC1.02□□□□□ -2.25
CMC4P56277 MIR4753-201ENST00000585119 83 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC010928.2-201ENST00000588017 287 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC016727.2-201ENST00000603988 621 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AL645939.4-201ENST00000604495 135 ntBASIC1.02□□□□□ -2.25
CMC4P56277 RN7SKP299-201ENST00000606679 301 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC004492.1-201ENST00000607036 742 ntBASIC1.02□□□□□ -2.25
CMC4P56277 AC104458.1-201ENST00000608243 463 ntBASIC1.02□□□□□ -2.25
CMC4P56277 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.02□□□□□ -2.25
CMC4P56277 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.02□□□□□ -2.25
CMC4P56277 MIR338-201ENST00000636369 67 ntBASIC1.02□□□□□ -2.25
CMC4P56277 MTND5P26-201ENST00000426018 1752 ntBASIC1.01□□□□□ -2.25
CMC4P56277 Y_RNA.140-201ENST00000363474 103 ntBASIC1.01□□□□□ -2.25
CMC4P56277 RNU6-418P-201ENST00000384035 107 ntBASIC1.01□□□□□ -2.25
CMC4P56277 SNORD26-201ENST00000384147 75 ntBASIC1.01□□□□□ -2.25
CMC4P56277 MIR515-2-201ENST00000384883 83 ntBASIC1.01□□□□□ -2.25
CMC4P56277 MIR515-1-201ENST00000384884 83 ntBASIC1.01□□□□□ -2.25
CMC4P56277 MIR586-201ENST00000385035 97 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AF228730.1-201ENST00000397972 663 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.01□□□□□ -2.25
CMC4P56277 AC027119.1-201ENST00000440877 241 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AC004386.2-201ENST00000441858 148 ntBASIC1.01□□□□□ -2.25
CMC4P56277 NFU1P2-201ENST00000448700 469 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AC099513.1-201ENST00000490423 301 ntBASIC1.01□□□□□ -2.25
CMC4P56277 RNU6-1041P-201ENST00000516254 102 ntBASIC1.01□□□□□ -2.25
CMC4P56277 RNA5SP384-201ENST00000516615 116 ntBASIC1.01□□□□□ -2.25
CMC4P56277 RNU6-405P-201ENST00000516637 110 ntBASIC1.01□□□□□ -2.25
CMC4P56277 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AC104576.1-201ENST00000524225 88 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.01□□□□□ -2.25
CMC4P56277 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.01□□□□□ -2.25
CMC4P56277 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.01□□□□□ -2.25
CMC4P56277 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.01□□□□□ -2.25
CMC4P56277 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.01□□□□□ -2.25
CMC4P56277 AC015688.6-201ENST00000577737 104 ntBASIC1.01□□□□□ -2.25
CMC4P56277 MIR4421-201ENST00000578133 69 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AL121757.2-201ENST00000611223 313 ntBASIC1.01□□□□□ -2.25
CMC4P56277 FAM157A-202ENST00000615155 405 ntBASIC1.01□□□□□ -2.25
CMC4P56277 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.01□□□□□ -2.25
CMC4P56277 ICE2P2-201ENST00000483823 2787 ntBASIC1□□□□□ -2.25
CMC4P56277 RNU1-62P-201ENST00000362599 164 ntBASIC1□□□□□ -2.25
CMC4P56277 RNU6-1085P-201ENST00000363576 107 ntBASIC1□□□□□ -2.25
CMC4P56277 RNU6-522P-201ENST00000364497 107 ntBASIC1□□□□□ -2.25
CMC4P56277 SNORD1A-201ENST00000364968 72 ntBASIC1□□□□□ -2.25
CMC4P56277 RNU6-259P-201ENST00000383999 107 ntBASIC1□□□□□ -2.25
CMC4P56277 RNU6-968P-201ENST00000384076 107 ntBASIC1□□□□□ -2.25
CMC4P56277 MIR194-1-201ENST00000384892 85 ntBASIC1□□□□□ -2.25
CMC4P56277 RNU6-955P-201ENST00000410497 104 ntBASIC1□□□□□ -2.25
CMC4P56277 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1□□□□□ -2.25
CMC4P56277 HSPE1P24-201ENST00000450782 238 ntBASIC1□□□□□ -2.25
CMC4P56277 MTND3P16-201ENST00000452205 344 ntBASIC1□□□□□ -2.25
CMC4P56277 snoU13.30-201ENST00000458951 104 ntBASIC1□□□□□ -2.25
CMC4P56277 AF186996.7-201ENST00000492781 209 ntBASIC1□□□□□ -2.25
CMC4P56277 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1□□□□□ -2.25
CMC4P56277 RNU6-1038P-201ENST00000516516 104 ntBASIC1□□□□□ -2.25
CMC4P56277 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1□□□□□ -2.25
CMC4P56277 RRN3P3-201ENST00000549207 578 ntBASIC1□□□□□ -2.25
CMC4P56277 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1□□□□□ -2.25
CMC4P56277 MIR4303-201ENST00000581299 66 ntBASIC1□□□□□ -2.25
CMC4P56277 MIR5006-201ENST00000583027 110 ntBASIC1□□□□□ -2.25
CMC4P56277 AP000907.4-201ENST00000604143 237 ntBASIC1□□□□□ -2.25
CMC4P56277 SNRPGP20-201ENST00000604477 205 ntBASIC1□□□□□ -2.25
CMC4P56277 MIR3976-201ENST00000606807 139 ntBASIC1□□□□□ -2.25
CMC4P56277 AC068792.1-201ENST00000621354 417 ntBASIC1□□□□□ -2.25
CMC4P56277 AL359880.1-201ENST00000621879 266 ntBASIC1□□□□□ -2.25
CMC4P56277 AC008873.1-201ENST00000625051 138 ntBASIC1□□□□□ -2.25
CMC4P56277 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
CMC4P56277 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CMC4P56277 Y_RNA.123-201ENST00000363338 102 ntBASIC0.99□□□□□ -2.25
CMC4P56277 SNORD115-8-201ENST00000363856 82 ntBASIC0.99□□□□□ -2.25
CMC4P56277 RNU4-13P-201ENST00000364019 141 ntBASIC0.99□□□□□ -2.25
CMC4P56277 Y_RNA.231-201ENST00000364358 102 ntBASIC0.99□□□□□ -2.25
CMC4P56277 SNORD115-38-201ENST00000365037 82 ntBASIC0.99□□□□□ -2.25
CMC4P56277 RNU6-128P-201ENST00000383976 107 ntBASIC0.99□□□□□ -2.25
CMC4P56277 SNORA67.2-201ENST00000384300 149 ntBASIC0.99□□□□□ -2.25
CMC4P56277 MIR548B-201ENST00000385247 97 ntBASIC0.99□□□□□ -2.25
CMC4P56277 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CMC4P56277 MTCO3P40-201ENST00000392516 676 ntBASIC0.99□□□□□ -2.25
CMC4P56277 CALM2P3-201ENST00000400429 449 ntBASIC0.99□□□□□ -2.25
CMC4P56277 RNU4-62P-201ENST00000410125 130 ntBASIC0.99□□□□□ -2.25
CMC4P56277 RNU2-7P-201ENST00000410794 178 ntBASIC0.99□□□□□ -2.25
CMC4P56277 RNU6-325P-201ENST00000411132 105 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms