Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 UBE2V2P2-201ENST00000587677 504 ntBASIC2.01□□□□□ -2.09
CDH13P55290 MIR6873-201ENST00000622788 63 ntBASIC2.01□□□□□ -2.09
CDH13P55290 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
CDH13P55290 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
CDH13P55290 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CDH13P55290 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
CDH13P55290 RNU5F-3P-201ENST00000363767 117 ntBASIC2□□□□□ -2.09
CDH13P55290 RNA5SP493-201ENST00000364115 91 ntBASIC2□□□□□ -2.09
CDH13P55290 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
CDH13P55290 SNORA12.2-201ENST00000391040 156 ntBASIC2□□□□□ -2.09
CDH13P55290 RNU11-3P-201ENST00000391111 133 ntBASIC2□□□□□ -2.09
CDH13P55290 AL356432.1-201ENST00000405809 419 ntBASIC2□□□□□ -2.09
CDH13P55290 MIR1283-1-201ENST00000408494 87 ntBASIC2□□□□□ -2.09
CDH13P55290 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2□□□□□ -2.09
CDH13P55290 SNRPEP8-201ENST00000442866 260 ntBASIC2□□□□□ -2.09
CDH13P55290 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
CDH13P55290 RNU2-34P-201ENST00000516534 121 ntBASIC2□□□□□ -2.09
CDH13P55290 RNU6-344P-201ENST00000516635 111 ntBASIC2□□□□□ -2.09
CDH13P55290 RNU6-307P-201ENST00000516743 106 ntBASIC2□□□□□ -2.09
CDH13P55290 AC134698.4-201ENST00000523451 826 ntBASIC2□□□□□ -2.09
CDH13P55290 CBX3P8-201ENST00000532412 525 ntBASIC2□□□□□ -2.09
CDH13P55290 AC027288.2-201ENST00000553028 243 ntBASIC2□□□□□ -2.09
CDH13P55290 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2□□□□□ -2.09
CDH13P55290 AP001094.1-201ENST00000579805 193 ntBASIC2□□□□□ -2.09
CDH13P55290 CYP2C61P-201ENST00000604072 290 ntBASIC2□□□□□ -2.09
CDH13P55290 AC009229.3-201ENST00000608056 282 ntBASIC2□□□□□ -2.09
CDH13P55290 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2□□□□□ -2.09
CDH13P55290 ZNF204P-201ENST00000416749 2397 ntBASIC2□□□□□ -2.09
CDH13P55290 Y_RNA.2-201ENST00000362330 96 ntBASIC1.99□□□□□ -2.09
CDH13P55290 RNU6-23P-201ENST00000363283 107 ntBASIC1.99□□□□□ -2.09
CDH13P55290 Y_RNA.132-201ENST00000363421 102 ntBASIC1.99□□□□□ -2.09
CDH13P55290 SNORA72.1-201ENST00000363485 129 ntBASIC1.99□□□□□ -2.09
CDH13P55290 AL512604.1-201ENST00000404812 257 ntBASIC1.99□□□□□ -2.09
CDH13P55290 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
CDH13P55290 RNA5SP508-201ENST00000411327 119 ntBASIC1.99□□□□□ -2.09
CDH13P55290 AL139156.1-201ENST00000412785 841 ntBASIC1.99□□□□□ -2.09
CDH13P55290 HMGN2P3-201ENST00000433603 273 ntBASIC1.99□□□□□ -2.09
CDH13P55290 HMGN2P5-201ENST00000436882 273 ntBASIC1.99□□□□□ -2.09
CDH13P55290 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH13P55290 MTCO1P44-201ENST00000441935 243 ntBASIC1.99□□□□□ -2.09
CDH13P55290 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH13P55290 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH13P55290 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH13P55290 MIR3169-201ENST00000578032 83 ntBASIC1.99□□□□□ -2.09
CDH13P55290 MIR5701-3-201ENST00000578890 82 ntBASIC1.99□□□□□ -2.09
CDH13P55290 MIR5701-1-201ENST00000585138 82 ntBASIC1.99□□□□□ -2.09
CDH13P55290 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH13P55290 AC100812.1-201ENST00000607622 580 ntBASIC1.99□□□□□ -2.09
CDH13P55290 MIR5701-2-201ENST00000615634 82 ntBASIC1.99□□□□□ -2.09
CDH13P55290 PISRT1.1-201ENST00000616930 107 ntBASIC1.99□□□□□ -2.09
CDH13P55290 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
CDH13P55290 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH13P55290 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH13P55290 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CDH13P55290 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH13P55290 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH13P55290 RNU1-62P-201ENST00000362599 164 ntBASIC1.98□□□□□ -2.09
CDH13P55290 RNU6-280P-201ENST00000364145 104 ntBASIC1.98□□□□□ -2.09
CDH13P55290 SNORD114-6-201ENST00000364393 72 ntBASIC1.98□□□□□ -2.09
CDH13P55290 Y_RNA.405-201ENST00000383979 100 ntBASIC1.98□□□□□ -2.09
CDH13P55290 Y_RNA.451-201ENST00000384200 100 ntBASIC1.98□□□□□ -2.09
CDH13P55290 SNORA67.3-201ENST00000384366 140 ntBASIC1.98□□□□□ -2.09
CDH13P55290 Y_RNA.524-201ENST00000384564 100 ntBASIC1.98□□□□□ -2.09
CDH13P55290 Y_RNA.561-201ENST00000384694 100 ntBASIC1.98□□□□□ -2.09
CDH13P55290 RNU6-541P-201ENST00000384709 110 ntBASIC1.98□□□□□ -2.09
CDH13P55290 MIR487A-201ENST00000385009 80 ntBASIC1.98□□□□□ -2.09
CDH13P55290 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
CDH13P55290 RNU6-159P-201ENST00000391080 106 ntBASIC1.98□□□□□ -2.09
CDH13P55290 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CDH13P55290 AC004866.1-201ENST00000411748 78 ntBASIC1.98□□□□□ -2.09
CDH13P55290 AL357134.1-201ENST00000445848 426 ntBASIC1.98□□□□□ -2.09
CDH13P55290 MTND4P18-201ENST00000447010 465 ntBASIC1.98□□□□□ -2.09
CDH13P55290 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH13P55290 AC114982.1-201ENST00000469402 321 ntBASIC1.98□□□□□ -2.09
CDH13P55290 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH13P55290 RPL23AP94-201ENST00000512518 302 ntBASIC1.98□□□□□ -2.09
CDH13P55290 IGKV3-31-201ENST00000523109 329 ntBASIC1.98□□□□□ -2.09
CDH13P55290 RRN3P3-201ENST00000549207 578 ntBASIC1.98□□□□□ -2.09
CDH13P55290 AL121579.1-201ENST00000555129 305 ntBASIC1.98□□□□□ -2.09
CDH13P55290 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
CDH13P55290 AC243960.4-201ENST00000600532 288 ntBASIC1.98□□□□□ -2.09
CDH13P55290 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
CDH13P55290 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH13P55290 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CDH13P55290 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDH13P55290 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDH13P55290 RNU6-545P-201ENST00000362681 104 ntBASIC1.97□□□□□ -2.09
CDH13P55290 Y_RNA.142-201ENST00000363491 102 ntBASIC1.97□□□□□ -2.09
CDH13P55290 Y_RNA.474-201ENST00000384341 102 ntBASIC1.97□□□□□ -2.09
CDH13P55290 MIR586-201ENST00000385035 97 ntBASIC1.97□□□□□ -2.09
CDH13P55290 SNORA75.4-201ENST00000391278 119 ntBASIC1.97□□□□□ -2.09
CDH13P55290 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDH13P55290 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH13P55290 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AC139712.2-201ENST00000424302 339 ntBASIC1.97□□□□□ -2.09
CDH13P55290 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH13P55290 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
CDH13P55290 AC067942.3-201ENST00000512025 362 ntBASIC1.97□□□□□ -2.09
CDH13P55290 Y_RNA.706-201ENST00000516933 99 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms