Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TOMM22P6-201ENST00000465035 409 ntBASIC2.09□□□□□ -2.07
CDH11P55287 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH11P55287 AC022616.8-201ENST00000533569 253 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AC004584.2-201ENST00000570407 410 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AL355297.2-201ENST00000604792 129 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AC100812.1-201ENST00000607622 580 ntBASIC2.09□□□□□ -2.07
CDH11P55287 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AC138305.3-201ENST00000624988 240 ntBASIC2.09□□□□□ -2.07
CDH11P55287 AC016717.2-201ENST00000609089 5141 ntBASIC2.09□□□□□ -2.07
CDH11P55287 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CDH11P55287 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CDH11P55287 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CDH11P55287 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CDH11P55287 Y_RNA.106-201ENST00000363189 100 ntBASIC2.08□□□□□ -2.08
CDH11P55287 Y_RNA.138-201ENST00000363462 102 ntBASIC2.08□□□□□ -2.08
CDH11P55287 Y_RNA.252-201ENST00000364556 101 ntBASIC2.08□□□□□ -2.08
CDH11P55287 RNU6-474P-201ENST00000384243 107 ntBASIC2.08□□□□□ -2.08
CDH11P55287 MIR549A-201ENST00000385268 96 ntBASIC2.08□□□□□ -2.08
CDH11P55287 RNU6-700P-201ENST00000391043 107 ntBASIC2.08□□□□□ -2.08
CDH11P55287 RNU6-159P-201ENST00000391080 106 ntBASIC2.08□□□□□ -2.08
CDH11P55287 RNU1-139P-201ENST00000391307 165 ntBASIC2.08□□□□□ -2.08
CDH11P55287 SNORA3.2-201ENST00000408221 125 ntBASIC2.08□□□□□ -2.08
CDH11P55287 RNU6-1156P-201ENST00000410365 100 ntBASIC2.08□□□□□ -2.08
CDH11P55287 AC004866.1-201ENST00000411748 78 ntBASIC2.08□□□□□ -2.08
CDH11P55287 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH11P55287 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH11P55287 RPL23AP50-201ENST00000434149 455 ntBASIC2.08□□□□□ -2.08
CDH11P55287 RPS15AP28-201ENST00000435088 386 ntBASIC2.08□□□□□ -2.08
CDH11P55287 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH11P55287 AP000870.1-201ENST00000472927 406 ntBASIC2.08□□□□□ -2.08
CDH11P55287 Y_RNA.701-201ENST00000516812 110 ntBASIC2.08□□□□□ -2.08
CDH11P55287 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH11P55287 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH11P55287 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH11P55287 MIR4658-201ENST00000584344 65 ntBASIC2.08□□□□□ -2.08
CDH11P55287 AC103810.6-201ENST00000606708 136 ntBASIC2.08□□□□□ -2.08
CDH11P55287 MIR1244-1-201ENST00000612829 85 ntBASIC2.08□□□□□ -2.08
CDH11P55287 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH11P55287 MIR1248-201ENST00000629190 106 ntBASIC2.08□□□□□ -2.08
CDH11P55287 MIR1244-3-201ENST00000635744 85 ntBASIC2.08□□□□□ -2.08
CDH11P55287 MIR1244-2-201ENST00000636449 85 ntBASIC2.08□□□□□ -2.08
CDH11P55287 MIR1244-4-202ENST00000636813 85 ntBASIC2.08□□□□□ -2.08
CDH11P55287 ZNF658B-202ENST00000615961 3375 ntBASIC2.08□□□□□ -2.08
CDH11P55287 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
CDH11P55287 MIR369-201ENST00000362155 70 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU1-76P-201ENST00000362903 159 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU1-91P-201ENST00000364746 163 ntBASIC2.07□□□□□ -2.08
CDH11P55287 Y_RNA.319-201ENST00000365138 92 ntBASIC2.07□□□□□ -2.08
CDH11P55287 SNORA25B-201ENST00000365507 128 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU6-26P-201ENST00000383985 107 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU6-546P-201ENST00000383991 107 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU1-52P-201ENST00000384190 164 ntBASIC2.07□□□□□ -2.08
CDH11P55287 MIR10B-201ENST00000385011 110 ntBASIC2.07□□□□□ -2.08
CDH11P55287 MIR561-201ENST00000385216 97 ntBASIC2.07□□□□□ -2.08
CDH11P55287 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
CDH11P55287 MIR1261-201ENST00000408659 82 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU2-32P-201ENST00000411193 191 ntBASIC2.07□□□□□ -2.08
CDH11P55287 AL354751.2-201ENST00000415471 210 ntBASIC2.07□□□□□ -2.08
CDH11P55287 AL590556.1-201ENST00000423231 483 ntBASIC2.07□□□□□ -2.08
CDH11P55287 MTCYBP6-201ENST00000441810 138 ntBASIC2.07□□□□□ -2.08
CDH11P55287 CHEK2P4-201ENST00000450340 246 ntBASIC2.07□□□□□ -2.08
CDH11P55287 AC105758.1-201ENST00000506038 399 ntBASIC2.07□□□□□ -2.08
CDH11P55287 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.07□□□□□ -2.08
CDH11P55287 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.07□□□□□ -2.08
CDH11P55287 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.07□□□□□ -2.08
CDH11P55287 RNU6-1170P-201ENST00000515974 106 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU6-976P-201ENST00000516086 111 ntBASIC2.07□□□□□ -2.08
CDH11P55287 Y_RNA.706-201ENST00000516933 99 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNA5SP54-201ENST00000516951 92 ntBASIC2.07□□□□□ -2.08
CDH11P55287 RNU6-264P-201ENST00000517134 104 ntBASIC2.07□□□□□ -2.08
CDH11P55287 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH11P55287 7SK.7-201ENST00000603504 247 ntBASIC2.07□□□□□ -2.08
CDH11P55287 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
CDH11P55287 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CDH11P55287 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CDH11P55287 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDH11P55287 RNU6-222P-201ENST00000362438 107 ntBASIC2.06□□□□□ -2.08
CDH11P55287 RNU6-694P-201ENST00000364071 147 ntBASIC2.06□□□□□ -2.08
CDH11P55287 Y_RNA.364-201ENST00000365532 101 ntBASIC2.06□□□□□ -2.08
CDH11P55287 MIR1294-201ENST00000408503 142 ntBASIC2.06□□□□□ -2.08
CDH11P55287 RN7SKP192-201ENST00000411291 327 ntBASIC2.06□□□□□ -2.08
CDH11P55287 AC007098.1-201ENST00000420122 367 ntBASIC2.06□□□□□ -2.08
CDH11P55287 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH11P55287 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH11P55287 EIF1P2-201ENST00000428233 350 ntBASIC2.06□□□□□ -2.08
CDH11P55287 IFNA11P-201ENST00000446352 526 ntBASIC2.06□□□□□ -2.08
CDH11P55287 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH11P55287 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH11P55287 U8.22-201ENST00000459141 133 ntBASIC2.06□□□□□ -2.08
CDH11P55287 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
CDH11P55287 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH11P55287 MIR449C-201ENST00000516047 92 ntBASIC2.06□□□□□ -2.08
CDH11P55287 HSPE1P18-201ENST00000517602 280 ntBASIC2.06□□□□□ -2.08
CDH11P55287 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH11P55287 NDUFA5P6-201ENST00000542110 379 ntBASIC2.06□□□□□ -2.08
CDH11P55287 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH11P55287 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH11P55287 AC044792.1-201ENST00000593294 196 ntBASIC2.06□□□□□ -2.08
CDH11P55287 SNRPGP17-201ENST00000603780 214 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms