Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDH4P55283 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDH4P55283 RNU6-1322P-201ENST00000364309 107 ntBASIC1.33□□□□□ -2.2
CDH4P55283 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
CDH4P55283 RNU6-648P-201ENST00000410190 107 ntBASIC1.33□□□□□ -2.2
CDH4P55283 C8orf59P1-201ENST00000429930 303 ntBASIC1.33□□□□□ -2.2
CDH4P55283 FTH1P12-201ENST00000432137 551 ntBASIC1.33□□□□□ -2.2
CDH4P55283 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.33□□□□□ -2.2
CDH4P55283 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
CDH4P55283 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
CDH4P55283 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
CDH4P55283 FO393415.2-201ENST00000480085 343 ntBASIC1.33□□□□□ -2.2
CDH4P55283 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.33□□□□□ -2.2
CDH4P55283 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
CDH4P55283 MIR5692C1-201ENST00000585309 91 ntBASIC1.33□□□□□ -2.2
CDH4P55283 AC092747.3-201ENST00000603769 301 ntBASIC1.33□□□□□ -2.2
CDH4P55283 MIR3976-201ENST00000606807 139 ntBASIC1.33□□□□□ -2.2
CDH4P55283 AL157834.3-201ENST00000615543 103 ntBASIC1.33□□□□□ -2.2
CDH4P55283 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.33□□□□□ -2.2
CDH4P55283 AC124864.2-201ENST00000624736 186 ntBASIC1.33□□□□□ -2.2
CDH4P55283 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDH4P55283 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
CDH4P55283 RNU6-1019P-201ENST00000364424 107 ntBASIC1.32□□□□□ -2.2
CDH4P55283 SNORD1A-201ENST00000364968 72 ntBASIC1.32□□□□□ -2.2
CDH4P55283 RNU4-66P-201ENST00000365199 138 ntBASIC1.32□□□□□ -2.2
CDH4P55283 RNU6-418P-201ENST00000384035 107 ntBASIC1.32□□□□□ -2.2
CDH4P55283 MIR514A2-201ENST00000385131 88 ntBASIC1.32□□□□□ -2.2
CDH4P55283 MIR514A3-201ENST00000385132 88 ntBASIC1.32□□□□□ -2.2
CDH4P55283 MTCO3P40-201ENST00000392516 676 ntBASIC1.32□□□□□ -2.2
CDH4P55283 MTCO1P21-201ENST00000416634 589 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL135790.2-201ENST00000437701 267 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH4P55283 AC092473.1-201ENST00000441098 221 ntBASIC1.32□□□□□ -2.2
CDH4P55283 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH4P55283 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH4P55283 MTND3P16-201ENST00000452205 344 ntBASIC1.32□□□□□ -2.2
CDH4P55283 snoU13.6-201ENST00000458785 104 ntBASIC1.32□□□□□ -2.2
CDH4P55283 RNU6-612P-201ENST00000516909 102 ntBASIC1.32□□□□□ -2.2
CDH4P55283 RNU6-323P-201ENST00000521915 107 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH4P55283 AC084364.2-201ENST00000546924 395 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.32□□□□□ -2.2
CDH4P55283 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.32□□□□□ -2.2
CDH4P55283 NBR2-204ENST00000587322 63 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
CDH4P55283 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL121757.2-201ENST00000611223 313 ntBASIC1.32□□□□□ -2.2
CDH4P55283 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL121890.5-201ENST00000620848 304 ntBASIC1.32□□□□□ -2.2
CDH4P55283 AL359880.1-201ENST00000621879 266 ntBASIC1.32□□□□□ -2.2
CDH4P55283 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDH4P55283 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
CDH4P55283 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
CDH4P55283 RNU6-1042P-201ENST00000384204 107 ntBASIC1.31□□□□□ -2.2
CDH4P55283 Y_RNA.481-201ENST00000384373 102 ntBASIC1.31□□□□□ -2.2
CDH4P55283 SNORD37.1-201ENST00000390968 65 ntBASIC1.31□□□□□ -2.2
CDH4P55283 RPL30P13-201ENST00000418873 348 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH4P55283 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH4P55283 RNU6-1037P-201ENST00000459571 107 ntBASIC1.31□□□□□ -2.2
CDH4P55283 SRRM1P2-201ENST00000464531 1192 ntBASIC1.31□□□□□ -2.2
CDH4P55283 HMGN2P9-201ENST00000476875 229 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
CDH4P55283 Y_RNA.654-201ENST00000497848 106 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC091885.1-201ENST00000506658 268 ntBASIC1.31□□□□□ -2.2
CDH4P55283 RNA5SP481-201ENST00000516814 122 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC087854.1-201ENST00000519706 414 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC092807.2-201ENST00000609367 243 ntBASIC1.31□□□□□ -2.2
CDH4P55283 AC095038.3-201ENST00000634439 195 ntBASIC1.31□□□□□ -2.2
CDH4P55283 OR5AK4P-201ENST00000635912 903 ntBASIC1.31□□□□□ -2.2
CDH4P55283 RNU6-1085P-201ENST00000363576 107 ntBASIC1.3□□□□□ -2.2
CDH4P55283 RNU6-522P-201ENST00000364497 107 ntBASIC1.3□□□□□ -2.2
CDH4P55283 RNU6-1329P-201ENST00000365664 107 ntBASIC1.3□□□□□ -2.2
CDH4P55283 RNU6-780P-201ENST00000391030 104 ntBASIC1.3□□□□□ -2.2
CDH4P55283 TIMM9P3-201ENST00000428659 274 ntBASIC1.3□□□□□ -2.2
CDH4P55283 MTCO3P29-201ENST00000432119 779 ntBASIC1.3□□□□□ -2.2
CDH4P55283 Z83846.1-201ENST00000446798 265 ntBASIC1.3□□□□□ -2.2
CDH4P55283 RNU6-1208P-201ENST00000459588 107 ntBASIC1.3□□□□□ -2.2
CDH4P55283 AC019235.1-201ENST00000503847 207 ntBASIC1.3□□□□□ -2.2
CDH4P55283 AC079140.2-201ENST00000506193 142 ntBASIC1.3□□□□□ -2.2
CDH4P55283 AC092436.3-201ENST00000511788 257 ntBASIC1.3□□□□□ -2.2
CDH4P55283 AC025465.4-201ENST00000513422 638 ntBASIC1.3□□□□□ -2.2
CDH4P55283 Y_RNA.693-201ENST00000516641 110 ntBASIC1.3□□□□□ -2.2
CDH4P55283 RNU6-856P-201ENST00000516959 98 ntBASIC1.3□□□□□ -2.2
CDH4P55283 AC104576.1-201ENST00000524225 88 ntBASIC1.3□□□□□ -2.2
CDH4P55283 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.3□□□□□ -2.2
CDH4P55283 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH4P55283 AC025423.5-201ENST00000550230 219 ntBASIC1.3□□□□□ -2.2
CDH4P55283 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
CDH4P55283 CTHRC1P1-201ENST00000605383 469 ntBASIC1.3□□□□□ -2.2
CDH4P55283 FAM157A-202ENST00000615155 405 ntBASIC1.3□□□□□ -2.2
CDH4P55283 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH4P55283 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.29□□□□□ -2.2
CDH4P55283 AC121333.1-201ENST00000567488 2709 ntBASIC1.29□□□□□ -2.2
CDH4P55283 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
CDH4P55283 RNU6-227P-201ENST00000362865 103 ntBASIC1.29□□□□□ -2.2
CDH4P55283 RNU6-331P-201ENST00000384724 107 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms