Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC016256.1-201ENST00000547971 354 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 MIR3923-201ENST00000579521 83 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 MIR4273-201ENST00000582824 84 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 UBE2V2P2-201ENST00000587677 504 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 AL109918.3-201ENST00000603072 338 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 Z98751.3-201ENST00000604447 521 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 AL355073.2-201ENST00000612106 557 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 SNORA43.4-201ENST00000629559 138 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 AL133216.2-202ENST00000634512 349 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 AL450472.1-202ENST00000637286 180 ntBASIC1.68□□□□□ -2.14
EFNA3P52797 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
EFNA3P52797 SNORD32B-201ENST00000364460 84 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 RNU6-593P-201ENST00000364716 112 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 SNORD81.2-201ENST00000365153 76 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 RNU6-968P-201ENST00000384076 107 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 RNU6-306P-201ENST00000384617 107 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AL627390.1-201ENST00000396055 340 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 SUMO2P12-201ENST00000405924 140 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 MIR548K-201ENST00000408406 116 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
EFNA3P52797 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 RPS3AP52-201ENST00000435639 297 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AL603825.1-201ENST00000438481 80 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.67□□□□□ -2.14
EFNA3P52797 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
EFNA3P52797 snoU13.6-201ENST00000458785 104 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 HMGN1P12-201ENST00000499125 195 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AC103851.1-201ENST00000506833 274 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AC107393.1-201ENST00000512403 346 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.67□□□□□ -2.14
EFNA3P52797 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.67□□□□□ -2.14
EFNA3P52797 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.67□□□□□ -2.14
EFNA3P52797 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.67□□□□□ -2.14
EFNA3P52797 FGF7P1-201ENST00000582820 288 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AP000654.2-201ENST00000605633 586 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 AC005296.1-201ENST00000616145 209 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.67□□□□□ -2.14
EFNA3P52797 AC099654.5-201ENST00000636479 350 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 TPTEP1-208ENST00000636884 213 ntBASIC1.67□□□□□ -2.14
EFNA3P52797 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.67□□□□□ -2.14
EFNA3P52797 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
EFNA3P52797 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
EFNA3P52797 Y_RNA.142-201ENST00000363491 102 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 RNU6-378P-201ENST00000384324 107 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 RNU6-784P-201ENST00000384330 106 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 SNORA26.3-201ENST00000391119 136 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 MTND4P18-201ENST00000447010 465 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 MTND5P20-201ENST00000448677 143 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 RN7SL274P-201ENST00000492268 272 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 AC021146.2-201ENST00000504736 556 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
EFNA3P52797 RNU6-1016P-201ENST00000516689 94 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 RNA5SP490-201ENST00000517141 136 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.66□□□□□ -2.14
EFNA3P52797 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.66□□□□□ -2.14
EFNA3P52797 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.66□□□□□ -2.14
EFNA3P52797 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.66□□□□□ -2.14
EFNA3P52797 MTND4P12-201ENST00000498999 1377 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.66□□□□□ -2.14
EFNA3P52797 AC233981.2-201ENST00000611524 1614 ntBASIC1.66□□□□□ -2.14
EFNA3P52797 Y_RNA.184-201ENST00000363884 108 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 RNU6-1164P-201ENST00000364428 107 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 RNU6-1286P-201ENST00000383871 107 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 Y_RNA.482-201ENST00000384377 111 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 RNU6-601P-201ENST00000384540 107 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 RNU6-1009P-201ENST00000390996 107 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 MIR208B-201ENST00000401172 77 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 MIR1283-2-201ENST00000408621 87 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 PDCL2P1-201ENST00000419302 352 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.65□□□□□ -2.15
EFNA3P52797 AC012306.1-201ENST00000423267 114 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 AC093019.1-201ENST00000443135 252 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 Y_RNA.702-201ENST00000516843 96 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
EFNA3P52797 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.65□□□□□ -2.15
EFNA3P52797 CYP4A27P-201ENST00000567218 190 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
EFNA3P52797 7SK.7-201ENST00000603504 247 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 AL359314.1-201ENST00000616913 261 ntBASIC1.65□□□□□ -2.15
EFNA3P52797 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.64□□□□□ -2.15
EFNA3P52797 AC008555.8-201ENST00000623602 2168 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 Y_RNA.303-201ENST00000364998 94 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 RNU6-234P-201ENST00000365229 104 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 RNU6-26P-201ENST00000383985 107 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 AL356432.1-201ENST00000405809 419 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 MTCYBP2-201ENST00000407745 171 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 RNA5SP494-201ENST00000410653 129 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 RNU2-41P-201ENST00000410991 178 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 SRIP3-201ENST00000413200 219 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
EFNA3P52797 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.64□□□□□ -2.15
EFNA3P52797 AC245102.2-201ENST00000448956 180 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms