Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF144AP50876 AC008155.2-201ENST00000464337 397 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 RN7SL481P-201ENST00000477764 299 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 RPS29P19-201ENST00000479709 171 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF144AP50876 AL592156.1-201ENST00000508758 304 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF144AP50876 AC106785.1-201ENST00000565935 262 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 MIR5096-201ENST00000583713 70 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 AC110741.2-201ENST00000605278 268 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RNF144AP50876 MFSD8-242ENST00000641690 4199 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF144AP50876 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF144AP50876 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF144AP50876 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF144AP50876 Y_RNA.111-201ENST00000363248 100 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 RNU1-132P-201ENST00000364300 164 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 Y_RNA.328-201ENST00000365208 113 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF144AP50876 Y_RNA.558-201ENST00000384685 113 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 RNU6-750P-201ENST00000390946 107 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AC016397.1-201ENST00000412463 242 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AC017083.1-201ENST00000428093 483 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF144AP50876 RPL27AP5-201ENST00000469428 449 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AP002884.2-201ENST00000471647 395 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 RPS26P15-201ENST00000488067 348 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 RNU1-61P-201ENST00000516107 151 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 RNA5SP49-201ENST00000516450 115 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AC006064.5-201ENST00000541782 248 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 GNRHR2P1-201ENST00000555315 631 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF144AP50876 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF144AP50876 AC012531.5-201ENST00000611375 151 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 MIR6076-201ENST00000617521 113 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF144AP50876 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF144AP50876 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF144AP50876 AL596211.1-201ENST00000569873 2277 ntBASIC3.91□□□□□ -1.78
RNF144AP50876 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF144AP50876 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF144AP50876 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
RNF144AP50876 Y_RNA.163-201ENST00000363702 113 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 RNU1-32P-201ENST00000363937 159 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 RNA5SP509-201ENST00000364577 119 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF144AP50876 AL157831.1-201ENST00000426134 473 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 RPL30P14-201ENST00000482744 348 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 RN7SL810P-201ENST00000493031 276 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 MIR449C-201ENST00000516047 92 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 RNU6-126P-201ENST00000516685 103 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 RNA5SP73-201ENST00000516744 108 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 MIR4284-201ENST00000578924 81 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 AC008739.2-201ENST00000597006 317 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 MIR6758-201ENST00000620653 63 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 AC009831.4-201ENST00000620744 325 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF144AP50876 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF144AP50876 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.79
RNF144AP50876 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF144AP50876 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF144AP50876 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF144AP50876 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF144AP50876 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF144AP50876 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF144AP50876 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF144AP50876 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF144AP50876 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF144AP50876 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF144AP50876 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNF144AP50876 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF144AP50876 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.89□□□□□ -1.79
RNF144AP50876 RNU6-198P-201ENST00000384258 104 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 RNU6-975P-201ENST00000384296 105 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 SNORA11F-201ENST00000408237 128 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 AC016717.1-201ENST00000448918 286 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 SNORD11-201ENST00000459124 84 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 RNU7-23P-201ENST00000459465 62 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF144AP50876 RNU7-149P-201ENST00000516739 59 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 RNU6-762P-201ENST00000517107 102 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 AC079598.5-201ENST00000547460 117 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF144AP50876 MIR4662B-201ENST00000579498 81 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 AL365205.2-201ENST00000594586 68 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 AC114781.5-201ENST00000615297 108 ntBASIC3.89□□□□□ -1.79
RNF144AP50876 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RNF144AP50876 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNF144AP50876 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF144AP50876 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF144AP50876 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF144AP50876 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNF144AP50876 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF144AP50876 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF144AP50876 RNU1-14P-201ENST00000362759 152 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 RNU6-1209P-201ENST00000363655 107 ntBASIC3.88□□□□□ -1.79
RNF144AP50876 RNU6-49P-201ENST00000384256 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms