Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL096861.1-201ENST00000610899 123 ntBASIC0□□□□□ -2.41
SRP9P49458 AL512427.1-201ENST00000618593 349 ntBASIC0□□□□□ -2.41
SRP9P49458 AC008133.2-201ENST00000624540 351 ntBASIC0□□□□□ -2.41
SRP9P49458 AL450472.1-202ENST00000637286 180 ntBASIC0□□□□□ -2.41
SRP9P49458 U6.108-201ENST00000637764 58 ntBASIC0□□□□□ -2.41
SRP9P49458 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0□□□□□ -2.41
SRP9P49458 RNU6-428P-201ENST00000362942 107 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 MIR32-201ENST00000384965 70 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 RNU2-3P-201ENST00000410144 191 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 AL358176.2-201ENST00000425769 204 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 AC104332.1-201ENST00000440471 797 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 OR9P1P-201ENST00000496431 281 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.01□□□□□ -2.41
SRP9P49458 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
SRP9P49458 AC112206.4-201ENST00000515142 405 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.01□□□□□ -2.41
SRP9P49458 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 RNU1-142P-201ENST00000516682 145 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
SRP9P49458 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.01□□□□□ -2.41
SRP9P49458 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 AL391903.3-201ENST00000612158 163 ntBASIC-0.01□□□□□ -2.41
SRP9P49458 AC099786.3-201ENST00000565735 1410 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 AP000568.1-201ENST00000282964 442 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 AC073343.1-201ENST00000328239 651 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 U3.4-201ENST00000363352 213 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 RNU6-163P-201ENST00000384396 106 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 MRPL42P3-201ENST00000401492 326 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 CDK8P2-201ENST00000415020 547 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.02□□□□□ -2.41
SRP9P49458 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.02□□□□□ -2.41
SRP9P49458 MTND1P32-201ENST00000433043 938 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 AC091874.1-201ENST00000511402 339 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.02□□□□□ -2.41
SRP9P49458 AC109479.2-201ENST00000517842 174 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 LRRC6P1-201ENST00000532188 885 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.02□□□□□ -2.41
SRP9P49458 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.02□□□□□ -2.41
SRP9P49458 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 AC008507.2-201ENST00000588402 1176 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 AC024060.1-201ENST00000607052 494 ntBASIC-0.02□□□□□ -2.41
SRP9P49458 RNU6-433P-201ENST00000363216 104 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
SRP9P49458 RNA5SP219-201ENST00000390940 113 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 RNA5SP63-201ENST00000391225 112 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 AC090960.1-201ENST00000421072 306 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 RPL31P35-201ENST00000431058 377 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 AC079382.1-201ENST00000493346 557 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 AC106038.2-201ENST00000520706 568 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 RNU6-94P-201ENST00000607728 107 ntBASIC-0.03□□□□□ -2.41
SRP9P49458 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.03□□□□□ -2.41
SRP9P49458 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.04□□□□□ -2.42
SRP9P49458 RNU6-562P-201ENST00000362731 107 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNA5SP62-201ENST00000363457 110 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 SNORA2.2-201ENST00000365473 135 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNU6-975P-201ENST00000384296 105 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 SNORA24.1-201ENST00000384401 135 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNU6-298P-201ENST00000390888 96 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNA5SP504-201ENST00000410676 117 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RNU6-607P-201ENST00000411283 108 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 MTCO2P34-201ENST00000421994 607 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.04□□□□□ -2.42
SRP9P49458 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.04□□□□□ -2.42
SRP9P49458 AL133396.1-201ENST00000432048 687 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.04□□□□□ -2.42
SRP9P49458 AC093850.1-201ENST00000454121 251 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 LINC01399-202ENST00000458450 244 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AC016632.1-201ENST00000503994 196 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AC116353.3-201ENST00000511215 249 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AC068587.4-201ENST00000533893 186 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.04□□□□□ -2.42
SRP9P49458 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.04□□□□□ -2.42
SRP9P49458 AP001542.1-201ENST00000591314 200 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 SNRPGP20-201ENST00000604477 205 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 RAC1P9-201ENST00000604990 392 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 AC100812.1-201ENST00000607622 580 ntBASIC-0.04□□□□□ -2.42
SRP9P49458 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
SRP9P49458 SNORD56.2-201ENST00000363242 71 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 RNU6-716P-201ENST00000365621 103 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.05□□□□□ -2.42
SRP9P49458 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.05□□□□□ -2.42
SRP9P49458 AC005534.2-201ENST00000431047 433 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 MTND4LP26-201ENST00000518144 282 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.05□□□□□ -2.42
SRP9P49458 AC016256.1-201ENST00000547971 354 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 AC008521.1-201ENST00000587471 187 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.05□□□□□ -2.42
SRP9P49458 AL359075.3-201ENST00000613288 217 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 AC006386.1-201ENST00000619436 415 ntBASIC-0.05□□□□□ -2.42
SRP9P49458 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
SRP9P49458 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.06□□□□□ -2.42
SRP9P49458 RNU6-413P-201ENST00000384115 107 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms