Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR3941-201ENST00000582572 103 ntBASIC0.49□□□□□ -2.33
RPL28P46779 MIR5006-201ENST00000583027 110 ntBASIC0.49□□□□□ -2.33
RPL28P46779 Z99497.2-201ENST00000603634 310 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AC022217.4-201ENST00000604389 163 ntBASIC0.49□□□□□ -2.33
RPL28P46779 GHRLOS.1-201ENST00000610995 70 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AC006001.4-201ENST00000622243 395 ntBASIC0.49□□□□□ -2.33
RPL28P46779 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RPL28P46779 RNA5SP432-201ENST00000362480 116 ntBASIC0.48□□□□□ -2.33
RPL28P46779 RNU4-48P-201ENST00000365559 182 ntBASIC0.48□□□□□ -2.33
RPL28P46779 MIR586-201ENST00000385035 97 ntBASIC0.48□□□□□ -2.33
RPL28P46779 SNORA12.1-201ENST00000390873 148 ntBASIC0.48□□□□□ -2.33
RPL28P46779 RNA5SP323-201ENST00000391094 133 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AC016909.1-201ENST00000415916 166 ntBASIC0.48□□□□□ -2.33
RPL28P46779 MTCO2P34-201ENST00000421994 607 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AC004941.2-201ENST00000427009 228 ntBASIC0.48□□□□□ -2.33
RPL28P46779 ISCA1P6-201ENST00000427740 390 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AC009961.2-201ENST00000435771 251 ntBASIC0.48□□□□□ -2.33
RPL28P46779 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL28P46779 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.48□□□□□ -2.33
RPL28P46779 AC105758.1-201ENST00000506038 399 ntBASIC0.48□□□□□ -2.33
RPL28P46779 MTATP6P9-201ENST00000515039 680 ntBASIC0.48□□□□□ -2.33
RPL28P46779 RNA5SP102-201ENST00000516865 106 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AC090142.3-201ENST00000519012 385 ntBASIC0.48□□□□□ -2.33
RPL28P46779 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL28P46779 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.48□□□□□ -2.33
RPL28P46779 AC004817.2-201ENST00000561794 651 ntBASIC0.48□□□□□ -2.33
RPL28P46779 MIR3682-201ENST00000581338 84 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.48□□□□□ -2.33
RPL28P46779 AL391834.2-201ENST00000609982 546 ntBASIC0.48□□□□□ -2.33
RPL28P46779 MIR8054-201ENST00000620877 86 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AL513423.1-201ENST00000621695 132 ntBASIC0.48□□□□□ -2.33
RPL28P46779 AC106754.1-201ENST00000562632 1513 ntBASIC0.48□□□□□ -2.33
RPL28P46779 RNU5B-2P-201ENST00000363036 113 ntBASIC0.47□□□□□ -2.33
RPL28P46779 RNY4P34-201ENST00000364779 95 ntBASIC0.47□□□□□ -2.33
RPL28P46779 RNU6-969P-201ENST00000383900 105 ntBASIC0.47□□□□□ -2.33
RPL28P46779 MIR653-201ENST00000385279 96 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AF228730.1-201ENST00000397972 663 ntBASIC0.47□□□□□ -2.33
RPL28P46779 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
RPL28P46779 RPS3AP1-201ENST00000413190 320 ntBASIC0.47□□□□□ -2.33
RPL28P46779 MTCO2P3-201ENST00000442543 421 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.47□□□□□ -2.33
RPL28P46779 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.47□□□□□ -2.33
RPL28P46779 SCARNA18-201ENST00000459004 134 ntBASIC0.47□□□□□ -2.33
RPL28P46779 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.47□□□□□ -2.33
RPL28P46779 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.47□□□□□ -2.33
RPL28P46779 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.47□□□□□ -2.33
RPL28P46779 AC008015.1-201ENST00000555505 465 ntBASIC0.47□□□□□ -2.33
RPL28P46779 MIR4698-201ENST00000577795 80 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AC146944.4-201ENST00000602697 718 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AL590095.2-201ENST00000604136 117 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AP001596.2-201ENST00000608410 312 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AC006566.1-201ENST00000608943 513 ntBASIC0.47□□□□□ -2.33
RPL28P46779 SNORD3E-202ENST00000627253 216 ntBASIC0.47□□□□□ -2.33
RPL28P46779 AC009541.1-201ENST00000438279 2662 ntBASIC0.47□□□□□ -2.33
RPL28P46779 MTND4P4-201ENST00000439033 1366 ntBASIC0.46□□□□□ -2.34
RPL28P46779 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.46□□□□□ -2.34
RPL28P46779 SNORA80D-201ENST00000384488 135 ntBASIC0.46□□□□□ -2.34
RPL28P46779 SNORD41-201ENST00000386967 70 ntBASIC0.46□□□□□ -2.34
RPL28P46779 MIR1253-201ENST00000408273 105 ntBASIC0.46□□□□□ -2.34
RPL28P46779 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.46□□□□□ -2.34
RPL28P46779 RNU6-195P-201ENST00000411352 109 ntBASIC0.46□□□□□ -2.34
RPL28P46779 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL28P46779 CDK8P2-201ENST00000415020 547 ntBASIC0.46□□□□□ -2.34
RPL28P46779 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.46□□□□□ -2.34
RPL28P46779 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.46□□□□□ -2.34
RPL28P46779 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL28P46779 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.46□□□□□ -2.34
RPL28P46779 MTCO3P18-201ENST00000440206 761 ntBASIC0.46□□□□□ -2.34
RPL28P46779 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL28P46779 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL28P46779 Y_RNA.638-201ENST00000459374 113 ntBASIC0.46□□□□□ -2.34
RPL28P46779 RPS26P48-201ENST00000491713 339 ntBASIC0.46□□□□□ -2.34
RPL28P46779 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.46□□□□□ -2.34
RPL28P46779 RN7SKP265-201ENST00000516448 223 ntBASIC0.46□□□□□ -2.34
RPL28P46779 RNU1-142P-201ENST00000516682 145 ntBASIC0.46□□□□□ -2.34
RPL28P46779 RNU6-323P-201ENST00000521915 107 ntBASIC0.46□□□□□ -2.34
RPL28P46779 AC025423.5-201ENST00000550230 219 ntBASIC0.46□□□□□ -2.34
RPL28P46779 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.46□□□□□ -2.34
RPL28P46779 MIR4781-201ENST00000585250 76 ntBASIC0.46□□□□□ -2.34
RPL28P46779 AC068790.2-201ENST00000602601 557 ntBASIC0.46□□□□□ -2.34
RPL28P46779 AL359075.3-201ENST00000613288 217 ntBASIC0.46□□□□□ -2.34
RPL28P46779 AL603839.4-201ENST00000624658 1005 ntBASIC0.46□□□□□ -2.34
RPL28P46779 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
RPL28P46779 MIR605-201ENST00000385078 83 ntBASIC0.45□□□□□ -2.34
RPL28P46779 MIR660-201ENST00000385235 97 ntBASIC0.45□□□□□ -2.34
RPL28P46779 RNU6-57P-201ENST00000411348 103 ntBASIC0.45□□□□□ -2.34
RPL28P46779 HMGN1P14-201ENST00000412459 517 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.45□□□□□ -2.34
RPL28P46779 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL28P46779 Z99497.1-201ENST00000421282 135 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.45□□□□□ -2.34
RPL28P46779 AC074290.1-201ENST00000448883 135 ntBASIC0.45□□□□□ -2.34
RPL28P46779 MTCO3P8-201ENST00000453691 755 ntBASIC0.45□□□□□ -2.34
RPL28P46779 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.45□□□□□ -2.34
RPL28P46779 RNU7-167P-201ENST00000459160 62 ntBASIC0.45□□□□□ -2.34
RPL28P46779 RNU7-57P-201ENST00000459540 60 ntBASIC0.45□□□□□ -2.34
RPL28P46779 RPS29P27-201ENST00000463711 170 ntBASIC0.45□□□□□ -2.34
RPL28P46779 HMGB1P29-201ENST00000505659 499 ntBASIC0.45□□□□□ -2.34
RPL28P46779 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.45□□□□□ -2.34
RPL28P46779 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms