Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 U2.20-201ENST00000613956 192 ntBASIC1.86□□□□□ -2.11
FEN1P39748 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.9-201ENST00000615427 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.11-201ENST00000616345 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.2-201ENST00000616535 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.3-201ENST00000617785 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.19-201ENST00000618602 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 RNU2-1-201ENST00000618664 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.6-201ENST00000619225 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.5-201ENST00000619465 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 U2.10-201ENST00000620268 191 ntBASIC1.86□□□□□ -2.11
FEN1P39748 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
FEN1P39748 RNU1-76P-201ENST00000362903 159 ntBASIC1.85□□□□□ -2.11
FEN1P39748 SNORA18.2-201ENST00000383865 132 ntBASIC1.85□□□□□ -2.11
FEN1P39748 MIR32-201ENST00000384965 70 ntBASIC1.85□□□□□ -2.11
FEN1P39748 AL357139.1-201ENST00000407792 426 ntBASIC1.85□□□□□ -2.11
FEN1P39748 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
FEN1P39748 RNU4-14P-201ENST00000410858 122 ntBASIC1.85□□□□□ -2.11
FEN1P39748 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
FEN1P39748 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.85□□□□□ -2.11
FEN1P39748 snoU13.30-201ENST00000458951 104 ntBASIC1.85□□□□□ -2.11
FEN1P39748 RNU7-14P-201ENST00000459331 62 ntBASIC1.85□□□□□ -2.11
FEN1P39748 AC007215.1-201ENST00000464893 276 ntBASIC1.85□□□□□ -2.11
FEN1P39748 RPL30P10-201ENST00000488148 337 ntBASIC1.85□□□□□ -2.11
FEN1P39748 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.85□□□□□ -2.11
FEN1P39748 RPS23P5-201ENST00000495419 428 ntBASIC1.85□□□□□ -2.11
FEN1P39748 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.85□□□□□ -2.11
FEN1P39748 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.85□□□□□ -2.11
FEN1P39748 AL121579.1-201ENST00000555129 305 ntBASIC1.85□□□□□ -2.11
FEN1P39748 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.85□□□□□ -2.11
FEN1P39748 UBE2V2P2-201ENST00000587677 504 ntBASIC1.85□□□□□ -2.11
FEN1P39748 AC243960.4-201ENST00000600532 288 ntBASIC1.85□□□□□ -2.11
FEN1P39748 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.85□□□□□ -2.11
FEN1P39748 RPL17P51-201ENST00000605218 238 ntBASIC1.85□□□□□ -2.11
FEN1P39748 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.85□□□□□ -2.11
FEN1P39748 AC005296.1-201ENST00000616145 209 ntBASIC1.85□□□□□ -2.11
FEN1P39748 AC099654.5-201ENST00000636479 350 ntBASIC1.85□□□□□ -2.11
FEN1P39748 MTND4P12-201ENST00000498999 1377 ntBASIC1.85□□□□□ -2.11
FEN1P39748 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
FEN1P39748 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
FEN1P39748 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
FEN1P39748 Y_RNA.2-201ENST00000362330 96 ntBASIC1.84□□□□□ -2.11
FEN1P39748 SNORD115-32-201ENST00000364079 82 ntBASIC1.84□□□□□ -2.11
FEN1P39748 SNORD14D-201ENST00000384390 87 ntBASIC1.84□□□□□ -2.11
FEN1P39748 MIR518A2-201ENST00000384966 87 ntBASIC1.84□□□□□ -2.11
FEN1P39748 AL512604.1-201ENST00000404812 257 ntBASIC1.84□□□□□ -2.11
FEN1P39748 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
FEN1P39748 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
FEN1P39748 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.84□□□□□ -2.11
FEN1P39748 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
FEN1P39748 TOMM22P6-201ENST00000465035 409 ntBASIC1.84□□□□□ -2.11
FEN1P39748 RPL23AP42-201ENST00000471152 471 ntBASIC1.84□□□□□ -2.11
FEN1P39748 Y_RNA.708-201ENST00000516950 96 ntBASIC1.84□□□□□ -2.11
FEN1P39748 CBX3P8-201ENST00000532412 525 ntBASIC1.84□□□□□ -2.11
FEN1P39748 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
FEN1P39748 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.84□□□□□ -2.11
FEN1P39748 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.84□□□□□ -2.11
FEN1P39748 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
FEN1P39748 AC016727.1-205ENST00000605437 569 ntBASIC1.84□□□□□ -2.11
FEN1P39748 AC009229.3-201ENST00000608056 282 ntBASIC1.84□□□□□ -2.11
FEN1P39748 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.84□□□□□ -2.11
FEN1P39748 AC005562.2-201ENST00000618264 111 ntBASIC1.84□□□□□ -2.11
FEN1P39748 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
FEN1P39748 ZNF299P-201ENST00000406845 1804 ntBASIC1.83□□□□□ -2.12
FEN1P39748 Y_RNA.99-201ENST00000363138 105 ntBASIC1.83□□□□□ -2.12
FEN1P39748 RNU6-595P-201ENST00000363944 107 ntBASIC1.83□□□□□ -2.12
FEN1P39748 RNU6-1164P-201ENST00000364428 107 ntBASIC1.83□□□□□ -2.12
FEN1P39748 Y_RNA.332-201ENST00000365271 113 ntBASIC1.83□□□□□ -2.12
FEN1P39748 SNORA12.2-201ENST00000391040 156 ntBASIC1.83□□□□□ -2.12
FEN1P39748 RN7SKP284-201ENST00000411002 343 ntBASIC1.83□□□□□ -2.12
FEN1P39748 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.83□□□□□ -2.12
FEN1P39748 NCOR1P3-201ENST00000420479 303 ntBASIC1.83□□□□□ -2.12
FEN1P39748 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.83□□□□□ -2.12
FEN1P39748 AC004386.2-201ENST00000441858 148 ntBASIC1.83□□□□□ -2.12
FEN1P39748 AC245102.2-201ENST00000448956 180 ntBASIC1.83□□□□□ -2.12
FEN1P39748 MTCO3P8-201ENST00000453691 755 ntBASIC1.83□□□□□ -2.12
FEN1P39748 RPL7P42-201ENST00000481005 679 ntBASIC1.83□□□□□ -2.12
FEN1P39748 AC091951.2-201ENST00000500762 203 ntBASIC1.83□□□□□ -2.12
FEN1P39748 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
FEN1P39748 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.83□□□□□ -2.12
FEN1P39748 AP001094.1-201ENST00000579805 193 ntBASIC1.83□□□□□ -2.12
FEN1P39748 MIR548S-201ENST00000581352 82 ntBASIC1.83□□□□□ -2.12
FEN1P39748 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
FEN1P39748 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.83□□□□□ -2.12
FEN1P39748 RMST_6.1-201ENST00000611980 203 ntBASIC1.83□□□□□ -2.12
FEN1P39748 AL359757.2-201ENST00000624309 274 ntBASIC1.83□□□□□ -2.12
FEN1P39748 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
FEN1P39748 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
FEN1P39748 Y_RNA.142-201ENST00000363491 102 ntBASIC1.82□□□□□ -2.12
FEN1P39748 Y_RNA.404-201ENST00000383978 102 ntBASIC1.82□□□□□ -2.12
FEN1P39748 RNY3P14-201ENST00000384309 102 ntBASIC1.82□□□□□ -2.12
FEN1P39748 Y_RNA.474-201ENST00000384341 102 ntBASIC1.82□□□□□ -2.12
FEN1P39748 MIR29C-201ENST00000385231 88 ntBASIC1.82□□□□□ -2.12
FEN1P39748 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
FEN1P39748 SNORA40.19-201ENST00000390846 128 ntBASIC1.82□□□□□ -2.12
FEN1P39748 BX510359.4-201ENST00000423750 193 ntBASIC1.82□□□□□ -2.12
FEN1P39748 SNRPEP8-201ENST00000442866 260 ntBASIC1.82□□□□□ -2.12
FEN1P39748 Y_RNA.635-201ENST00000459041 101 ntBASIC1.82□□□□□ -2.12
FEN1P39748 RN7SKP210-201ENST00000459176 261 ntBASIC1.82□□□□□ -2.12
FEN1P39748 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms