Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 NBR2-204ENST00000587322 63 ntBASIC1.54□□□□□ -2.16
RFC4P35249 AC245008.1-201ENST00000608123 476 ntBASIC1.54□□□□□ -2.16
RFC4P35249 AC103591.3-201ENST00000608684 209 ntBASIC1.54□□□□□ -2.16
RFC4P35249 AC092807.2-201ENST00000609367 243 ntBASIC1.54□□□□□ -2.16
RFC4P35249 MIR6779-201ENST00000617283 64 ntBASIC1.54□□□□□ -2.16
RFC4P35249 AC103705.1-201ENST00000619013 241 ntBASIC1.54□□□□□ -2.16
RFC4P35249 AC009541.1-201ENST00000438279 2662 ntBASIC1.54□□□□□ -2.16
RFC4P35249 RNU6-342P-201ENST00000384521 104 ntBASIC1.53□□□□□ -2.16
RFC4P35249 RNU6-1106P-201ENST00000390845 107 ntBASIC1.53□□□□□ -2.16
RFC4P35249 SNORA26.3-201ENST00000391119 136 ntBASIC1.53□□□□□ -2.16
RFC4P35249 MIR208B-201ENST00000401172 77 ntBASIC1.53□□□□□ -2.16
RFC4P35249 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.53□□□□□ -2.16
RFC4P35249 TIMM9P3-201ENST00000428659 274 ntBASIC1.53□□□□□ -2.16
RFC4P35249 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.53□□□□□ -2.16
RFC4P35249 RNU6-1037P-201ENST00000459571 107 ntBASIC1.53□□□□□ -2.16
RFC4P35249 FO393415.2-201ENST00000480085 343 ntBASIC1.53□□□□□ -2.16
RFC4P35249 AC107401.1-201ENST00000503426 685 ntBASIC1.53□□□□□ -2.16
RFC4P35249 AC114801.2-201ENST00000503825 781 ntBASIC1.53□□□□□ -2.16
RFC4P35249 AC087854.1-201ENST00000519706 414 ntBASIC1.53□□□□□ -2.16
RFC4P35249 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.53□□□□□ -2.16
RFC4P35249 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.53□□□□□ -2.16
RFC4P35249 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RFC4P35249 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.53□□□□□ -2.16
RFC4P35249 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.53□□□□□ -2.16
RFC4P35249 MIR3169-201ENST00000578032 83 ntBASIC1.53□□□□□ -2.16
RFC4P35249 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.53□□□□□ -2.16
RFC4P35249 MIR4295-201ENST00000585286 85 ntBASIC1.53□□□□□ -2.16
RFC4P35249 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.17
RFC4P35249 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
RFC4P35249 RNU6-82P-201ENST00000363970 107 ntBASIC1.52□□□□□ -2.17
RFC4P35249 RNU6-1317P-201ENST00000364582 104 ntBASIC1.52□□□□□ -2.17
RFC4P35249 Y_RNA.332-201ENST00000365271 113 ntBASIC1.52□□□□□ -2.17
RFC4P35249 MIR598-201ENST00000384868 97 ntBASIC1.52□□□□□ -2.17
RFC4P35249 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
RFC4P35249 SNORA12.2-201ENST00000391040 156 ntBASIC1.52□□□□□ -2.17
RFC4P35249 RNA5SP100-201ENST00000410903 110 ntBASIC1.52□□□□□ -2.17
RFC4P35249 RNA5SP59-201ENST00000410922 110 ntBASIC1.52□□□□□ -2.17
RFC4P35249 MTCO3P41-201ENST00000414801 328 ntBASIC1.52□□□□□ -2.17
RFC4P35249 MTND4LP16-201ENST00000440828 295 ntBASIC1.52□□□□□ -2.17
RFC4P35249 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.52□□□□□ -2.17
RFC4P35249 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
RFC4P35249 snoU13.6-201ENST00000458785 104 ntBASIC1.52□□□□□ -2.17
RFC4P35249 RPL9P9-202ENST00000466501 579 ntBASIC1.52□□□□□ -2.17
RFC4P35249 AC087343.1-201ENST00000477341 475 ntBASIC1.52□□□□□ -2.17
RFC4P35249 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.52□□□□□ -2.17
RFC4P35249 AC093534.1-201ENST00000504977 132 ntBASIC1.52□□□□□ -2.17
RFC4P35249 RNU6-1098P-201ENST00000516772 96 ntBASIC1.52□□□□□ -2.17
RFC4P35249 Y_RNA.704-201ENST00000516851 102 ntBASIC1.52□□□□□ -2.17
RFC4P35249 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.52□□□□□ -2.17
RFC4P35249 AL512360.1-201ENST00000555346 234 ntBASIC1.52□□□□□ -2.17
RFC4P35249 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.52□□□□□ -2.17
RFC4P35249 CYP4A27P-201ENST00000567218 190 ntBASIC1.52□□□□□ -2.17
RFC4P35249 PRR13P7-201ENST00000605538 430 ntBASIC1.52□□□□□ -2.17
RFC4P35249 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.52□□□□□ -2.17
RFC4P35249 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.52□□□□□ -2.17
RFC4P35249 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.52□□□□□ -2.17
RFC4P35249 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
RFC4P35249 LINC02555-201ENST00000563933 1951 ntBASIC1.51□□□□□ -2.17
RFC4P35249 RNU4-75P-201ENST00000364621 146 ntBASIC1.51□□□□□ -2.17
RFC4P35249 RNU6-438P-201ENST00000365561 103 ntBASIC1.51□□□□□ -2.17
RFC4P35249 RNU6-1329P-201ENST00000365664 107 ntBASIC1.51□□□□□ -2.17
RFC4P35249 Y_RNA.481-201ENST00000384373 102 ntBASIC1.51□□□□□ -2.17
RFC4P35249 Y_RNA.559-201ENST00000384686 107 ntBASIC1.51□□□□□ -2.17
RFC4P35249 RNU6-648P-201ENST00000410190 107 ntBASIC1.51□□□□□ -2.17
RFC4P35249 RNU6-1068P-201ENST00000410958 103 ntBASIC1.51□□□□□ -2.17
RFC4P35249 SNRPEP10-201ENST00000420249 274 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AC012306.1-201ENST00000423267 114 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.51□□□□□ -2.17
RFC4P35249 RNU7-14P-201ENST00000459331 62 ntBASIC1.51□□□□□ -2.17
RFC4P35249 RPS29P27-201ENST00000463711 170 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.51□□□□□ -2.17
RFC4P35249 Y_RNA.654-201ENST00000497848 106 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AC005741.1-201ENST00000511094 432 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AC025465.4-201ENST00000513422 638 ntBASIC1.51□□□□□ -2.17
RFC4P35249 SNORA19.2-201ENST00000516013 114 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.51□□□□□ -2.17
RFC4P35249 EIF4A1P12-201ENST00000551910 141 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AC021231.3-201ENST00000558497 370 ntBASIC1.51□□□□□ -2.17
RFC4P35249 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.51□□□□□ -2.17
RFC4P35249 AC090517.1-201ENST00000569307 266 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
RFC4P35249 AL359880.1-201ENST00000621879 266 ntBASIC1.51□□□□□ -2.17
RFC4P35249 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.51□□□□□ -2.17
RFC4P35249 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
RFC4P35249 MIR340-201ENST00000362125 95 ntBASIC1.5□□□□□ -2.17
RFC4P35249 Y_RNA.167-201ENST00000363735 109 ntBASIC1.5□□□□□ -2.17
RFC4P35249 Y_RNA.372-201ENST00000365599 102 ntBASIC1.5□□□□□ -2.17
RFC4P35249 RNU6-1093P-201ENST00000391194 107 ntBASIC1.5□□□□□ -2.17
RFC4P35249 AC139712.2-201ENST00000424302 339 ntBASIC1.5□□□□□ -2.17
RFC4P35249 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.5□□□□□ -2.17
RFC4P35249 MRPS10P2-201ENST00000431226 381 ntBASIC1.5□□□□□ -2.17
RFC4P35249 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
RFC4P35249 AC130509.1-201ENST00000464158 433 ntBASIC1.5□□□□□ -2.17
RFC4P35249 AC092991.1-201ENST00000477176 376 ntBASIC1.5□□□□□ -2.17
RFC4P35249 AC083904.1-201ENST00000487828 231 ntBASIC1.5□□□□□ -2.17
RFC4P35249 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.5□□□□□ -2.17
RFC4P35249 RNU5F-4P-201ENST00000516581 114 ntBASIC1.5□□□□□ -2.17
RFC4P35249 Y_RNA.693-201ENST00000516641 110 ntBASIC1.5□□□□□ -2.17
RFC4P35249 RNU6-1332P-201ENST00000516666 104 ntBASIC1.5□□□□□ -2.17
RFC4P35249 SNORD60.2-201ENST00000516883 86 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms