Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
CASQ1P31415 RNU6-917P-201ENST00000516294 104 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 SNORA25.17-201ENST00000517184 124 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.39□□□□□ -2.35
CASQ1P31415 CYP3A137P-201ENST00000562436 69 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.39□□□□□ -2.35
CASQ1P31415 MTND4P5-201ENST00000435821 1374 ntBASIC0.39□□□□□ -2.35
CASQ1P31415 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
CASQ1P31415 MIR96-201ENST00000362288 78 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 RNY1P12-201ENST00000364251 105 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 RNU4-48P-201ENST00000365559 182 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 SNORD99-201ENST00000408612 74 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 MTCO2P34-201ENST00000421994 607 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 AL031274.1-201ENST00000450334 232 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 RNU6-229P-201ENST00000516614 102 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 RNU6-1178P-201ENST00000516674 107 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 AC090572.1-201ENST00000519251 160 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 MIR5006-201ENST00000583027 110 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 AC091304.9-201ENST00000612091 226 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
CASQ1P31415 Y_RNA.367-201ENST00000365544 101 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.37□□□□□ -2.35
CASQ1P31415 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.37□□□□□ -2.35
CASQ1P31415 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.37□□□□□ -2.35
CASQ1P31415 AC092628.1-201ENST00000436250 252 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.37□□□□□ -2.35
CASQ1P31415 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.37□□□□□ -2.35
CASQ1P31415 U7.7-201ENST00000459276 60 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 TRMT112P2-201ENST00000512910 132 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.37□□□□□ -2.35
CASQ1P31415 AC008015.1-201ENST00000555505 465 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 SUB1P2-201ENST00000556401 297 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.37□□□□□ -2.35
CASQ1P31415 MIR4778-201ENST00000577635 80 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 PRELID3BP2-201ENST00000605362 201 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 AC097065.2-201ENST00000608159 533 ntBASIC0.37□□□□□ -2.35
CASQ1P31415 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.37□□□□□ -2.35
CASQ1P31415 CDK8P2-201ENST00000415020 547 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 AC104850.1-201ENST00000435940 476 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.36□□□□□ -2.35
CASQ1P31415 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.36□□□□□ -2.35
CASQ1P31415 AC025465.4-201ENST00000513422 638 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.36□□□□□ -2.35
CASQ1P31415 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 AC016256.1-201ENST00000547971 354 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.36□□□□□ -2.35
CASQ1P31415 AC005771.1-201ENST00000585581 349 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 AC002044.1-201ENST00000606707 158 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 TCL6_2.1-201ENST00000615162 119 ntBASIC0.36□□□□□ -2.35
CASQ1P31415 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CASQ1P31415 SNORA2.2-201ENST00000365473 135 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.35□□□□□ -2.35
CASQ1P31415 SNORA67.2-201ENST00000384300 149 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AL355143.1-201ENST00000407101 841 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AL365184.2-201ENST00000431139 435 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AC004386.2-201ENST00000441858 148 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AL031313.1-201ENST00000448435 256 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.35□□□□□ -2.35
CASQ1P31415 MTATP6P14-201ENST00000455189 673 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 RPL39P5-202ENST00000512505 151 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AGGF1P4-201ENST00000568249 801 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AC004584.2-201ENST00000570407 410 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
CASQ1P31415 U6.114-201ENST00000636407 96 ntBASIC0.35□□□□□ -2.35
CASQ1P31415 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
CASQ1P31415 MIR122-201ENST00000385044 85 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 RNU6-57P-201ENST00000411348 103 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.34□□□□□ -2.36
CASQ1P31415 AC008134.1-201ENST00000420943 193 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 AC098934.3-201ENST00000430450 190 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 EPS15P1-201ENST00000448836 336 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 AC245047.8-201ENST00000456455 284 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.34□□□□□ -2.36
CASQ1P31415 AC022493.2-201ENST00000506122 481 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 AC079140.5-201ENST00000507882 310 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 RNU2-69P-201ENST00000516061 100 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 RNU6-323P-201ENST00000521915 107 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.34□□□□□ -2.36
CASQ1P31415 MTND1P15-201ENST00000579262 949 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 MIR4999-201ENST00000585029 91 ntBASIC0.34□□□□□ -2.36
CASQ1P31415 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 RNU6-1287P-201ENST00000362914 107 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 Y_RNA.480-201ENST00000384364 102 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 RNU6-1060P-201ENST00000384664 107 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 Y_RNA.595-201ENST00000410403 105 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 MTND3P17-201ENST00000416968 344 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.33□□□□□ -2.36
CASQ1P31415 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.33□□□□□ -2.36
CASQ1P31415 MTCO3P8-201ENST00000453691 755 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.33□□□□□ -2.36
CASQ1P31415 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.33□□□□□ -2.36
CASQ1P31415 AC108729.3-201ENST00000513484 108 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.33□□□□□ -2.36
CASQ1P31415 RNU2-46P-201ENST00000517038 113 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 AP002001.1-203ENST00000534002 267 ntBASIC0.33□□□□□ -2.36
CASQ1P31415 MIR4775-201ENST00000581168 75 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms