Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 RNU7-187P-201ENST00000458985 68 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXA9P31269 AC016632.1-201ENST00000503994 196 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 AC026371.1-201ENST00000551867 419 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXA9P31269 Z98751.3-201ENST00000604447 521 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXA9P31269 PCGEM1.1-201ENST00000613431 131 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 MIR6504-201ENST00000613520 61 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 AL138726.1-201ENST00000614873 333 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 AC009541.1-201ENST00000438279 2662 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 AC233981.2-201ENST00000611524 1614 ntBASIC1.48□□□□□ -2.17
HOXA9P31269 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HOXA9P31269 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HOXA9P31269 Y_RNA.116-201ENST00000363292 103 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 RNU6-743P-201ENST00000364151 106 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 Y_RNA.530-201ENST00000384587 101 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 RNU6-1106P-201ENST00000390845 107 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 RNU6-192P-201ENST00000391253 100 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC007098.1-201ENST00000420122 367 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AL590632.1-201ENST00000424289 371 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC245102.2-201ENST00000448956 180 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXA9P31269 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.47□□□□□ -2.17
HOXA9P31269 AC007547.1-201ENST00000462177 490 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXA9P31269 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXA9P31269 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXA9P31269 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXA9P31269 MIR3923-201ENST00000579521 83 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 MIR3942-201ENST00000585264 109 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC016925.2-201ENST00000605108 242 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC007014.2-201ENST00000615581 479 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 AC098679.4-201ENST00000624241 654 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 MIR3662-201ENST00000637030 95 ntBASIC1.47□□□□□ -2.17
HOXA9P31269 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HOXA9P31269 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
HOXA9P31269 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 Y_RNA.151-201ENST00000363566 112 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 RNU6-877P-201ENST00000383868 107 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 RNU6-95P-201ENST00000384697 107 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 MIR518E-201ENST00000385252 88 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 BTF3L4P2-201ENST00000392798 346 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
HOXA9P31269 PTP4A1P4-201ENST00000512479 322 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 RNU6-256P-201ENST00000516747 97 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXA9P31269 MRPS36P4-201ENST00000534436 298 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 AC021231.3-201ENST00000558497 370 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 AC109446.1-201ENST00000566172 220 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.46□□□□□ -2.18
HOXA9P31269 AC080078.2-201ENST00000603766 501 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 AP000907.4-201ENST00000604143 237 ntBASIC1.46□□□□□ -2.18
HOXA9P31269 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HOXA9P31269 SNORD115-3-201ENST00000363100 82 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 Y_RNA.135-201ENST00000363439 95 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 RNU6-128P-201ENST00000383976 107 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 Y_RNA.414-201ENST00000384011 101 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 SNORA29-201ENST00000384183 140 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 RNU6-831P-201ENST00000384548 107 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 RNU6-373P-201ENST00000411247 98 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HOXA9P31269 ZNF885P-201ENST00000420174 1098 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 AC012306.1-201ENST00000423267 114 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.45□□□□□ -2.18
HOXA9P31269 HMGN2P18-201ENST00000450680 270 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC069439.1-201ENST00000494739 167 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.45□□□□□ -2.18
HOXA9P31269 AC093259.1-201ENST00000509755 300 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 RNU6-1314P-201ENST00000517139 104 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.45□□□□□ -2.18
HOXA9P31269 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 CYP4A27P-201ENST00000567218 190 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.45□□□□□ -2.18
HOXA9P31269 MIR3976-201ENST00000606807 139 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AL133215.3-201ENST00000609801 448 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC005520.5-201ENST00000613926 164 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC002553.4-201ENST00000616896 331 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 AC100810.6-201ENST00000638068 285 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.45□□□□□ -2.18
HOXA9P31269 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.45□□□□□ -2.18
HOXA9P31269 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HOXA9P31269 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HOXA9P31269 RNU5B-2P-201ENST00000363036 113 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms