Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Y_RNA.4-201ENST00000362333 112 ntBASIC4.05□□□□□ -1.76
RXRBP28702 RNU6-151P-201ENST00000364158 107 ntBASIC4.05□□□□□ -1.76
RXRBP28702 Y_RNA.273-201ENST00000364703 102 ntBASIC4.05□□□□□ -1.76
RXRBP28702 RNU6-898P-201ENST00000365627 104 ntBASIC4.05□□□□□ -1.76
RXRBP28702 SNORA36A-201ENST00000384221 132 ntBASIC4.05□□□□□ -1.76
RXRBP28702 RNU6-851P-201ENST00000384565 107 ntBASIC4.05□□□□□ -1.76
RXRBP28702 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RXRBP28702 SNORD67-201ENST00000390833 111 ntBASIC4.05□□□□□ -1.76
RXRBP28702 RNA5SP229-201ENST00000410809 99 ntBASIC4.05□□□□□ -1.76
RXRBP28702 AL358075.3-201ENST00000426289 226 ntBASIC4.05□□□□□ -1.76
RXRBP28702 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RXRBP28702 AP004242.1-201ENST00000533701 349 ntBASIC4.05□□□□□ -1.76
RXRBP28702 AC004832.5-201ENST00000608677 401 ntBASIC4.05□□□□□ -1.76
RXRBP28702 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RXRBP28702 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RXRBP28702 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
RXRBP28702 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RXRBP28702 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RXRBP28702 AL513302.2-201ENST00000562313 1842 ntBASIC4.05□□□□□ -1.76
RXRBP28702 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
RXRBP28702 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RXRBP28702 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.04□□□□□ -1.76
RXRBP28702 Y_RNA.121-201ENST00000363309 113 ntBASIC4.04□□□□□ -1.76
RXRBP28702 RNU6-873P-201ENST00000363833 107 ntBASIC4.04□□□□□ -1.76
RXRBP28702 Y_RNA.226-201ENST00000364337 114 ntBASIC4.04□□□□□ -1.76
RXRBP28702 AC092047.1-201ENST00000424997 240 ntBASIC4.04□□□□□ -1.76
RXRBP28702 RPL21P66-201ENST00000426566 466 ntBASIC4.04□□□□□ -1.76
RXRBP28702 RPL23AP67-201ENST00000465341 474 ntBASIC4.04□□□□□ -1.76
RXRBP28702 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.04□□□□□ -1.76
RXRBP28702 RNU7-121P-201ENST00000516604 62 ntBASIC4.04□□□□□ -1.76
RXRBP28702 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RXRBP28702 LINC00933-203ENST00000559812 219 ntBASIC4.04□□□□□ -1.76
RXRBP28702 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.04□□□□□ -1.76
RXRBP28702 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.04□□□□□ -1.76
RXRBP28702 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.04□□□□□ -1.76
RXRBP28702 AL356157.2-201ENST00000605122 111 ntBASIC4.04□□□□□ -1.76
RXRBP28702 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RXRBP28702 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.04□□□□□ -1.76
RXRBP28702 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RXRBP28702 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RXRBP28702 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RXRBP28702 AL035461.1-201ENST00000421490 332 ntBASIC4.03□□□□□ -1.76
RXRBP28702 VDAC1P3-201ENST00000434069 851 ntBASIC4.03□□□□□ -1.76
RXRBP28702 Y_RNA.637-201ENST00000459424 114 ntBASIC4.03□□□□□ -1.76
RXRBP28702 IGKV3-31-201ENST00000523109 329 ntBASIC4.03□□□□□ -1.76
RXRBP28702 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
RXRBP28702 AC010332.2-201ENST00000613083 1904 ntBASIC4.03□□□□□ -1.76
RXRBP28702 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RXRBP28702 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.03□□□□□ -1.77
RXRBP28702 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RXRBP28702 AC092593.1-201ENST00000515413 1815 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AC017071.1-201ENST00000564407 2204 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AC068700.1-201ENST00000565862 3754 ntBASIC4.02□□□□□ -1.77
RXRBP28702 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RXRBP28702 Y_RNA.182-201ENST00000363880 111 ntBASIC4.02□□□□□ -1.77
RXRBP28702 RNU6-153P-201ENST00000364422 104 ntBASIC4.02□□□□□ -1.77
RXRBP28702 RNU6-142P-201ENST00000384019 107 ntBASIC4.02□□□□□ -1.77
RXRBP28702 SNORD116-20-201ENST00000384529 92 ntBASIC4.02□□□□□ -1.77
RXRBP28702 RN7SKP192-201ENST00000411291 327 ntBASIC4.02□□□□□ -1.77
RXRBP28702 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.02□□□□□ -1.77
RXRBP28702 BTF3P11-201ENST00000426582 477 ntBASIC4.02□□□□□ -1.77
RXRBP28702 MTND4LP9-201ENST00000427694 174 ntBASIC4.02□□□□□ -1.77
RXRBP28702 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.02□□□□□ -1.77
RXRBP28702 RNA5SP468-201ENST00000516782 93 ntBASIC4.02□□□□□ -1.77
RXRBP28702 RNA5SP291-201ENST00000517222 105 ntBASIC4.02□□□□□ -1.77
RXRBP28702 DEFB131C-201ENST00000528817 165 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AP002001.1-203ENST00000534002 267 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AC020895.1-201ENST00000595362 272 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AC010999.1-201ENST00000611856 324 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AC024581.2-201ENST00000619986 252 ntBASIC4.02□□□□□ -1.77
RXRBP28702 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RXRBP28702 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
RXRBP28702 AC093010.3-201ENST00000570269 15214 ntBASIC4.01□□□□□ -1.77
RXRBP28702 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RXRBP28702 RNU6-778P-201ENST00000363269 103 ntBASIC4.01□□□□□ -1.77
RXRBP28702 Y_RNA.127-201ENST00000363386 109 ntBASIC4.01□□□□□ -1.77
RXRBP28702 MIR1289-2-201ENST00000408360 111 ntBASIC4.01□□□□□ -1.77
RXRBP28702 ELOCP21-201ENST00000412558 336 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AC074117.2-201ENST00000417130 397 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AC009237.8-201ENST00000445492 379 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.01□□□□□ -1.77
RXRBP28702 snoU13.6-201ENST00000458785 104 ntBASIC4.01□□□□□ -1.77
RXRBP28702 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AC018448.1-201ENST00000552843 316 ntBASIC4.01□□□□□ -1.77
RXRBP28702 MIR548X2-201ENST00000579776 100 ntBASIC4.01□□□□□ -1.77
RXRBP28702 MIR3684-201ENST00000579779 74 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AC090616.3-201ENST00000582184 217 ntBASIC4.01□□□□□ -1.77
RXRBP28702 DEFB117-201ENST00000602356 141 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AL138963.2-201ENST00000605137 226 ntBASIC4.01□□□□□ -1.77
RXRBP28702 AC091932.3-201ENST00000624223 323 ntBASIC4.01□□□□□ -1.77
RXRBP28702 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.01□□□□□ -1.77
RXRBP28702 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
RXRBP28702 Y_RNA.71-201ENST00000362892 104 ntBASIC4□□□□□ -1.77
RXRBP28702 SNORD56.1-201ENST00000362913 68 ntBASIC4□□□□□ -1.77
RXRBP28702 RNA5SP68-201ENST00000363885 119 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU6-275P-201ENST00000364910 107 ntBASIC4□□□□□ -1.77
RXRBP28702 Y_RNA.357-201ENST00000365487 109 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU4-17P-201ENST00000365598 141 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU6-140P-201ENST00000384566 108 ntBASIC4□□□□□ -1.77
RXRBP28702 RNU6-239P-201ENST00000390990 99 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms