Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC034114.1-201ENST00000520293 285 ntBASIC2.06□□□□□ -2.08
CDH3P22223 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH3P22223 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH3P22223 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.06□□□□□ -2.08
CDH3P22223 RAB11AP2-201ENST00000545905 639 ntBASIC2.06□□□□□ -2.08
CDH3P22223 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH3P22223 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.06□□□□□ -2.08
CDH3P22223 AC005296.1-201ENST00000616145 209 ntBASIC2.06□□□□□ -2.08
CDH3P22223 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
CDH3P22223 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH3P22223 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CDH3P22223 SNORD115-32-201ENST00000364079 82 ntBASIC2.05□□□□□ -2.08
CDH3P22223 RNU5E-4P-201ENST00000364931 120 ntBASIC2.05□□□□□ -2.08
CDH3P22223 Y_RNA.387-201ENST00000383918 102 ntBASIC2.05□□□□□ -2.08
CDH3P22223 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
CDH3P22223 SNORD116-29-201ENST00000384516 83 ntBASIC2.05□□□□□ -2.08
CDH3P22223 RNU6-310P-201ENST00000384655 107 ntBASIC2.05□□□□□ -2.08
CDH3P22223 MIR1294-201ENST00000408503 142 ntBASIC2.05□□□□□ -2.08
CDH3P22223 Y_RNA.604-201ENST00000410574 102 ntBASIC2.05□□□□□ -2.08
CDH3P22223 Y_RNA.646-201ENST00000410980 101 ntBASIC2.05□□□□□ -2.08
CDH3P22223 RNU2-41P-201ENST00000410991 178 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.05□□□□□ -2.08
CDH3P22223 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.05□□□□□ -2.08
CDH3P22223 SNRPEP8-201ENST00000442866 260 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC010095.1-201ENST00000443543 144 ntBASIC2.05□□□□□ -2.08
CDH3P22223 RPL23AP7-203ENST00000449021 469 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH3P22223 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.05□□□□□ -2.08
CDH3P22223 SNORA4.4-201ENST00000515921 135 ntBASIC2.05□□□□□ -2.08
CDH3P22223 SCARNA16.2-201ENST00000516520 172 ntBASIC2.05□□□□□ -2.08
CDH3P22223 DEFB131C-201ENST00000528817 165 ntBASIC2.05□□□□□ -2.08
CDH3P22223 NDUFA5P6-201ENST00000542110 379 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC233702.2-202ENST00000562547 291 ntBASIC2.05□□□□□ -2.08
CDH3P22223 MIR5701-3-201ENST00000578890 82 ntBASIC2.05□□□□□ -2.08
CDH3P22223 MIR5701-1-201ENST00000585138 82 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH3P22223 AL117336.2-201ENST00000602435 335 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC016727.2-201ENST00000603988 621 ntBASIC2.05□□□□□ -2.08
CDH3P22223 MIR5701-2-201ENST00000615634 82 ntBASIC2.05□□□□□ -2.08
CDH3P22223 PISRT1.1-201ENST00000616930 107 ntBASIC2.05□□□□□ -2.08
CDH3P22223 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH3P22223 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CDH3P22223 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDH3P22223 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDH3P22223 RNU6-1297P-201ENST00000384415 104 ntBASIC2.04□□□□□ -2.08
CDH3P22223 MIR32-201ENST00000384965 70 ntBASIC2.04□□□□□ -2.08
CDH3P22223 MIR549A-201ENST00000385268 96 ntBASIC2.04□□□□□ -2.08
CDH3P22223 MTCO3P29-201ENST00000432119 779 ntBASIC2.04□□□□□ -2.08
CDH3P22223 snoU13.30-201ENST00000458951 104 ntBASIC2.04□□□□□ -2.08
CDH3P22223 snoU13.26-201ENST00000459452 105 ntBASIC2.04□□□□□ -2.08
CDH3P22223 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH3P22223 MTND3P22-201ENST00000510932 243 ntBASIC2.04□□□□□ -2.08
CDH3P22223 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH3P22223 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.04□□□□□ -2.08
CDH3P22223 AC090517.1-201ENST00000569307 266 ntBASIC2.04□□□□□ -2.08
CDH3P22223 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.04□□□□□ -2.08
CDH3P22223 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
CDH3P22223 AC022202.1-201ENST00000613515 211 ntBASIC2.04□□□□□ -2.08
CDH3P22223 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.04□□□□□ -2.08
CDH3P22223 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.04□□□□□ -2.08
CDH3P22223 MTND4LP32-201ENST00000636111 270 ntBASIC2.04□□□□□ -2.08
CDH3P22223 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDH3P22223 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.03□□□□□ -2.08
CDH3P22223 RNU4-73P-201ENST00000363164 141 ntBASIC2.03□□□□□ -2.08
CDH3P22223 RNU6-234P-201ENST00000365229 104 ntBASIC2.03□□□□□ -2.08
CDH3P22223 RNU6-26P-201ENST00000383985 107 ntBASIC2.03□□□□□ -2.08
CDH3P22223 Y_RNA.490-201ENST00000384413 102 ntBASIC2.03□□□□□ -2.08
CDH3P22223 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
CDH3P22223 HMGN2P39-201ENST00000398005 273 ntBASIC2.03□□□□□ -2.08
CDH3P22223 AL023284.1-201ENST00000403956 276 ntBASIC2.03□□□□□ -2.08
CDH3P22223 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
CDH3P22223 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
CDH3P22223 MTCO3P10-201ENST00000455912 772 ntBASIC2.03□□□□□ -2.08
CDH3P22223 Y_RNA.632-201ENST00000459189 102 ntBASIC2.03□□□□□ -2.08
CDH3P22223 AC007215.1-201ENST00000464893 276 ntBASIC2.03□□□□□ -2.08
CDH3P22223 AL590705.4-201ENST00000532209 134 ntBASIC2.03□□□□□ -2.08
CDH3P22223 AC137590.2-201ENST00000619709 240 ntBASIC2.03□□□□□ -2.08
CDH3P22223 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CDH3P22223 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
CDH3P22223 ZNF702P-202ENST00000434269 1966 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.58-201ENST00000362807 102 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.67-201ENST00000362870 100 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.154-201ENST00000363624 102 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RNY3P1-201ENST00000365085 102 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RNY3-201ENST00000365484 102 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.405-201ENST00000383979 100 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.451-201ENST00000384200 100 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RNU6-17P-201ENST00000384245 107 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RNU6-611P-201ENST00000384276 104 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RNU6-18P-201ENST00000384527 107 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.524-201ENST00000384564 100 ntBASIC2.02□□□□□ -2.09
CDH3P22223 Y_RNA.561-201ENST00000384694 100 ntBASIC2.02□□□□□ -2.09
CDH3P22223 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDH3P22223 SNORA12.2-201ENST00000391040 156 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RNY4P36-201ENST00000391116 96 ntBASIC2.02□□□□□ -2.09
CDH3P22223 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH3P22223 AL353997.1-201ENST00000432936 108 ntBASIC2.02□□□□□ -2.09
CDH3P22223 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.02□□□□□ -2.09
CDH3P22223 RPL23AP3-201ENST00000453844 468 ntBASIC2.02□□□□□ -2.09
CDH3P22223 RN7SKP210-201ENST00000459176 261 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms