Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
COL5A1P20908 snoU109.2-201ENST00000459316 135 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RPL9P9-202ENST00000466501 579 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 PTP4A1P4-201ENST00000512479 322 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RNU6-559P-201ENST00000516151 98 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RNA5SP61-201ENST00000516453 100 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 HMGB1P14-201ENST00000557424 591 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AC008121.1-201ENST00000603244 268 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AC016727.2-201ENST00000603988 621 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AC018462.2-201ENST00000605375 395 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AC123912.5-201ENST00000605470 343 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RNU6-85P-201ENST00000605989 107 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AL022345.1-201ENST00000607292 135 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 RNU6-91P-201ENST00000607774 107 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AL121757.2-201ENST00000611223 313 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AL161423.1-201ENST00000613700 262 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AL138726.1-201ENST00000614873 333 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 Y_RNA.804-201ENST00000615262 101 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 MIR6128-201ENST00000615528 109 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AL159153.1-201ENST00000619688 317 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 AL162373.1-201ENST00000620433 407 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.27□□□□□ -2.21
COL5A1P20908 AC007792.1-201ENST00000623023 402 ntBASIC1.27□□□□□ -2.21
COL5A1P20908 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
COL5A1P20908 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL5A1P20908 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.26□□□□□ -2.21
COL5A1P20908 AC138393.1-203ENST00000327086 343 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.58-201ENST00000362807 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU1-105P-201ENST00000363470 161 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.154-201ENST00000363624 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.184-201ENST00000363884 108 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.813-201ENST00000364639 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNY3P1-201ENST00000365085 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNY3-201ENST00000365484 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.490-201ENST00000384413 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU6-658P-201ENST00000384606 106 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 MIR559-201ENST00000385188 96 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU1-139P-201ENST00000391307 165 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RPS29P13-201ENST00000402041 169 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AL591034.2-201ENST00000402839 359 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 AL356379.1-201ENST00000414105 126 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SKA2P1-201ENST00000425592 390 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.632-201ENST00000459189 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RPS27AP10-201ENST00000496103 208 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SNORA31.18-201ENST00000517043 134 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 AC103996.1-201ENST00000555468 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 AC021739.1-201ENST00000559631 174 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 AC005899.2-201ENST00000584353 90 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 OR1M4P-201ENST00000589199 287 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC090971.5-201ENST00000621102 293 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.26□□□□□ -2.21
COL5A1P20908 U4.7-201ENST00000638126 106 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
COL5A1P20908 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.26□□□□□ -2.21
COL5A1P20908 AC010889.1-201ENST00000566193 2666 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.67-201ENST00000362870 100 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.187-201ENST00000363918 113 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU6-694P-201ENST00000364071 147 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SNORA3A-201ENST00000364113 130 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU6-1329P-201ENST00000365664 107 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.419-201ENST00000384041 102 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 MIR10A-201ENST00000385043 110 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNA5SP219-201ENST00000390940 113 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU6-1245P-201ENST00000411130 106 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RNU6-325P-201ENST00000411132 105 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC016831.2-201ENST00000417179 352 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 MICF-203ENST00000432679 129 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 PCMTD1P1-201ENST00000455560 355 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 Y_RNA.635-201ENST00000459041 101 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RPS29P27-201ENST00000463711 170 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC130509.1-201ENST00000464158 433 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 RPL17P19-201ENST00000489069 552 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.26□□□□□ -2.21
COL5A1P20908 AC025423.5-201ENST00000550230 219 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SCOCP1-201ENST00000554676 349 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.26□□□□□ -2.21
COL5A1P20908 ELOCP5-201ENST00000604924 333 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 uc_338.14-201ENST00000613162 166 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC024581.2-201ENST00000619986 252 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 SDR42E1P4-201ENST00000620894 481 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 U6.99-201ENST00000637524 83 ntBASIC1.26□□□□□ -2.21
COL5A1P20908 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL5A1P20908 MTND5P10-201ENST00000603719 1809 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
COL5A1P20908 RNU6-78P-201ENST00000362897 107 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 RNU6-527P-201ENST00000363425 104 ntBASIC1.25□□□□□ -2.21
COL5A1P20908 SNORA38-201ENST00000363946 132 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms