Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 Y_RNA.127-201ENST00000363386 109 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 SNORA1.3-201ENST00000384676 136 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 RNU6-19P-201ENST00000384718 107 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 MIR513C-201ENST00000401352 84 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 RNA5SP504-201ENST00000410676 117 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPRAP18433 RNU6-344P-201ENST00000516635 111 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 RNU6-453P-201ENST00000516819 85 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPRAP18433 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.89□□□□□ -1.79
PTPRAP18433 AC109810.1-201ENST00000534066 224 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 AL360157.1-201ENST00000565962 87 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 RPS15AP11-201ENST00000594193 385 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 HSPE1P7-201ENST00000604681 321 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 TCL6_2.1-201ENST00000615162 119 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 AC068205.3-201ENST00000636385 468 ntBASIC3.89□□□□□ -1.79
PTPRAP18433 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPRAP18433 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPRAP18433 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTPRAP18433 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRAP18433 MIR422A-201ENST00000362286 90 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 Y_RNA.24-201ENST00000362508 103 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 Y_RNA.71-201ENST00000362892 104 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 Y_RNA.273-201ENST00000364703 102 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 MIR1289-1-201ENST00000408836 144 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 RPL23AP82-202ENST00000427528 469 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 SCARNA8-201ENST00000515924 131 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 EIF4A1P12-201ENST00000551910 141 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 AC027176.1-201ENST00000560204 514 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 MIR5006-201ENST00000583027 110 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 AL359881.1-201ENST00000602916 267 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPRAP18433 AC006386.2-201ENST00000624491 75 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 AC012005.1-201ENST00000624575 75 ntBASIC3.88□□□□□ -1.79
PTPRAP18433 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRAP18433 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPRAP18433 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPRAP18433 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTPRAP18433 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPRAP18433 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPRAP18433 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTPRAP18433 RNU4-15P-201ENST00000362613 141 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 SNORA80A-201ENST00000363922 136 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 SNORA18.2-201ENST00000383865 132 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RNU6-748P-201ENST00000384648 107 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RNU6-855P-201ENST00000410395 104 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 COTL1P1-201ENST00000422309 375 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 AL357552.1-201ENST00000445254 415 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 SNRPGP5-201ENST00000456003 220 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 HMGN2P16-201ENST00000456802 261 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RNU6-1211P-201ENST00000459179 105 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RPL23AP70-201ENST00000483361 460 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RPL23AP94-201ENST00000512518 302 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RNU6-1007P-201ENST00000516586 107 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 RNU6-1234P-201ENST00000516877 103 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPRAP18433 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPRAP18433 Y_RNA.802-201ENST00000614892 130 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 AC022149.2-201ENST00000621061 203 ntBASIC3.87□□□□□ -1.79
PTPRAP18433 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPRAP18433 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPRAP18433 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
PTPRAP18433 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPRAP18433 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRAP18433 Y_RNA.243-201ENST00000364481 109 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 SNORD116-14-201ENST00000383894 92 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 SNORD116-17-201ENST00000383929 92 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 RNU6-44P-201ENST00000384045 107 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 SNORD116-15-201ENST00000384445 92 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 Y_RNA.500-201ENST00000384466 111 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 SNORD116-19-201ENST00000384729 92 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PTPRAP18433 AL355497.1-201ENST00000406262 551 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 AL591034.1-201ENST00000407447 340 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 RNU6-710P-201ENST00000410424 105 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 RNU2-49P-201ENST00000410666 184 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 AIMP1P2-201ENST00000425294 312 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 AL353705.1-201ENST00000433468 480 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 HMGN2P20-201ENST00000437531 273 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 AC074290.1-201ENST00000448883 135 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPRAP18433 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPRAP18433 AL391813.1-201ENST00000603098 260 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 RNVU1-4-201ENST00000612985 164 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 AC008873.1-201ENST00000625051 138 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPRAP18433 AC006504.1-201ENST00000562493 3666 ntBASIC3.86□□□□□ -1.79
PTPRAP18433 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.85□□□□□ -1.79
PTPRAP18433 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPRAP18433 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPRAP18433 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPRAP18433 RNU1-75P-201ENST00000347264 129 ntBASIC3.85□□□□□ -1.79
PTPRAP18433 RNU6-199P-201ENST00000362954 107 ntBASIC3.85□□□□□ -1.79
PTPRAP18433 U3.9-201ENST00000363823 204 ntBASIC3.85□□□□□ -1.79
PTPRAP18433 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPRAP18433 RNU6-969P-201ENST00000383900 105 ntBASIC3.85□□□□□ -1.79
PTPRAP18433 RNU6-376P-201ENST00000384731 106 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms