Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
ERCC2P18074 BNIP3P10-201ENST00000605360 577 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.94□□□□□ -2.1
ERCC2P18074 AC009248.2-201ENST00000619826 254 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
ERCC2P18074 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
ERCC2P18074 MTND5P9-201ENST00000503854 1755 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
ERCC2P18074 CBX3P1-201ENST00000325243 554 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 Y_RNA.301-201ENST00000364990 103 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 U8.10-201ENST00000384260 133 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 AC004866.1-201ENST00000411748 78 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.93□□□□□ -2.1
ERCC2P18074 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.93□□□□□ -2.1
ERCC2P18074 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.93□□□□□ -2.1
ERCC2P18074 RNU6-358P-201ENST00000516564 75 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.93□□□□□ -2.1
ERCC2P18074 AP003033.1-201ENST00000527244 415 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 AC005786.1-201ENST00000588553 154 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 AC060780.3-201ENST00000589464 80 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 AC098657.3-201ENST00000620434 263 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 AC245060.5-201ENST00000610778 3293 ntBASIC1.93□□□□□ -2.1
ERCC2P18074 Y_RNA.248-201ENST00000364501 109 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 RNU4-9P-201ENST00000364951 139 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.92□□□□□ -2.1
ERCC2P18074 RNU6-418P-201ENST00000384035 107 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ERCC2P18074 MIR300-201ENST00000401138 83 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 MIR1283-1-201ENST00000408494 87 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.92□□□□□ -2.1
ERCC2P18074 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.92□□□□□ -2.1
ERCC2P18074 AL121890.1-201ENST00000435457 205 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.92□□□□□ -2.1
ERCC2P18074 AC009237.7-201ENST00000447357 229 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 FO393415.2-201ENST00000480085 343 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 YWHAEP4-201ENST00000505390 198 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.92□□□□□ -2.1
ERCC2P18074 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 SNRPGP20-201ENST00000604477 205 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.92□□□□□ -2.1
ERCC2P18074 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ERCC2P18074 ZNF204P-201ENST00000416749 2397 ntBASIC1.92□□□□□ -2.1
ERCC2P18074 MIR32-201ENST00000384965 70 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AL356776.1-201ENST00000406574 447 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ERCC2P18074 MTATP6P13-201ENST00000438531 667 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.91□□□□□ -2.1
ERCC2P18074 MTND1P17-201ENST00000448961 204 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AC018710.1-201ENST00000506509 158 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AC097473.1-201ENST00000508142 408 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.91□□□□□ -2.1
ERCC2P18074 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.91□□□□□ -2.1
ERCC2P18074 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.91□□□□□ -2.1
ERCC2P18074 RRN3P3-201ENST00000549207 578 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
ERCC2P18074 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.91□□□□□ -2.1
ERCC2P18074 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.91□□□□□ -2.1
ERCC2P18074 BX322639.1-202ENST00000423987 2213 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 AL159152.1-201ENST00000635019 2587 ntBASIC1.91□□□□□ -2.1
ERCC2P18074 MTND4P5-201ENST00000435821 1374 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 RNU6-510P-201ENST00000391239 108 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 AC009310.1-201ENST00000414414 451 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 MTCO3P46-201ENST00000425787 232 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 RNU6-329P-201ENST00000459618 107 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
ERCC2P18074 MIR4753-201ENST00000585119 83 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 AC083806.3-201ENST00000614016 455 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 MIR6128-201ENST00000615528 109 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
ERCC2P18074 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ERCC2P18074 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ERCC2P18074 RNU6-1059P-201ENST00000363752 98 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
ERCC2P18074 HMGB1P18-201ENST00000438801 619 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms