Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.9□□□□□ -2.55
HMGA1P17096 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.9□□□□□ -2.55
HMGA1P17096 AL591704.1-201ENST00000432574 275 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.9□□□□□ -2.55
HMGA1P17096 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.9□□□□□ -2.55
HMGA1P17096 AC087499.4-201ENST00000448505 178 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 snoU13.8-201ENST00000458890 104 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 snoU13.11-201ENST00000459219 104 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.9□□□□□ -2.55
HMGA1P17096 RNU6-143P-201ENST00000516942 93 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 AC007684.1-201ENST00000609671 477 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.9□□□□□ -2.55
HMGA1P17096 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.9□□□□□ -2.55
HMGA1P17096 MIR499B-201ENST00000636498 73 ntBASIC-0.9□□□□□ -2.55
HMGA1P17096 RNU6-432P-201ENST00000384196 109 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 RNU6-166P-201ENST00000384371 107 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 MIR1185-1-201ENST00000408598 86 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 AC023538.1-201ENST00000534576 736 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 AC095057.3-201ENST00000567102 1157 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 AC023824.3-201ENST00000569003 562 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 AC104695.3-201ENST00000604052 296 ntBASIC-0.91□□□□□ -2.56
HMGA1P17096 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.91□□□□□ -2.56
HMGA1P17096 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 RNU6-48P-201ENST00000384161 107 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 RNU6-114P-201ENST00000384704 105 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 MIR454-201ENST00000390180 115 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.92□□□□□ -2.56
HMGA1P17096 MTND4P15-201ENST00000437913 1033 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.92□□□□□ -2.56
HMGA1P17096 AC026410.2-201ENST00000460281 156 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.92□□□□□ -2.56
HMGA1P17096 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.92□□□□□ -2.56
HMGA1P17096 AC107401.1-201ENST00000503426 685 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 RNA5SP67-201ENST00000516422 131 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 RNU6-856P-201ENST00000516959 98 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 RBM11P1-201ENST00000604951 799 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 AC122133.1-201ENST00000613964 233 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 AL159153.1-201ENST00000619688 317 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 MIR4788-201ENST00000639104 80 ntBASIC-0.92□□□□□ -2.56
HMGA1P17096 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 RNA5SP467-201ENST00000391274 118 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 RNU4-30P-201ENST00000410245 143 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.93□□□□□ -2.56
HMGA1P17096 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AC069271.1-201ENST00000445577 156 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 MTND1P17-201ENST00000448961 204 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AC093850.1-201ENST00000454121 251 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.93□□□□□ -2.56
HMGA1P17096 RNU7-14P-201ENST00000459331 62 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AC109445.1-201ENST00000512356 383 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 RNA5SP135-201ENST00000517019 125 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 MIR4436A-201ENST00000585278 85 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AC110760.3-201ENST00000598794 467 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
HMGA1P17096 AC068792.1-201ENST00000621354 417 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AL356596.1-201ENST00000624230 379 ntBASIC-0.93□□□□□ -2.56
HMGA1P17096 AP000568.1-201ENST00000282964 442 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 RNY3P5-201ENST00000384127 102 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 SNORA2B-201ENST00000384583 137 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 AL133264.1-201ENST00000407157 562 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 MIR548L-201ENST00000408303 86 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 RNA5SP95-201ENST00000410319 137 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 AL663109.1-201ENST00000411498 844 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 COX7BP2-201ENST00000437976 242 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 AC107297.1-201ENST00000459991 176 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 SCARNA17-201ENST00000516183 144 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
HMGA1P17096 AC024995.1-201ENST00000523014 93 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 AP002453.2-201ENST00000533503 320 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.94□□□□□ -2.56
HMGA1P17096 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.94□□□□□ -2.56
HMGA1P17096 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.94□□□□□ -2.56
HMGA1P17096 AC109446.1-201ENST00000566172 220 ntBASIC-0.94□□□□□ -2.56
HMGA1P17096 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.94□□□□□ -2.56
HMGA1P17096 SNORD114-11-201ENST00000363738 75 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 SNORD31B-201ENST00000364977 69 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 RNU6-925P-201ENST00000384629 104 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 SNORA40C-201ENST00000391285 128 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 MTND2P9-201ENST00000422293 931 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 MTCO2P5-201ENST00000422621 426 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.95□□□□□ -2.56
HMGA1P17096 USP9YP29-201ENST00000445112 563 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.95□□□□□ -2.56
HMGA1P17096 AC091135.1-201ENST00000585943 307 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 MIR8054-201ENST00000620877 86 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 AC024940.5-201ENST00000622889 474 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 AC093875.1-201ENST00000623688 504 ntBASIC-0.95□□□□□ -2.56
HMGA1P17096 RNU4-15P-201ENST00000362613 141 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 SNORD56.1-201ENST00000362913 68 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 RNU6-359P-201ENST00000365466 108 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 RNU6-187P-201ENST00000384139 106 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 RNU6-43P-201ENST00000384302 107 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 RPS20P2-201ENST00000402520 389 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 AL079342.2-201ENST00000403367 482 ntBASIC-0.96□□□□□ -2.56
HMGA1P17096 AC015818.7-201ENST00000428754 109 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms