Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RPL23AP75-201ENST00000491601 451 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 MTND5P5-201ENST00000503764 376 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
MRPL3P09001 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.34□□□□□ -2.19
MRPL3P09001 AC093259.1-201ENST00000509755 300 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 AC008834.1-201ENST00000511612 175 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
MRPL3P09001 MIR4513-201ENST00000581077 86 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 AL022345.1-201ENST00000607292 135 ntBASIC1.34□□□□□ -2.19
MRPL3P09001 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
MRPL3P09001 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
MRPL3P09001 AC245060.5-201ENST00000610778 3293 ntBASIC1.34□□□□□ -2.2
MRPL3P09001 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.33□□□□□ -2.2
MRPL3P09001 MIR340-201ENST00000362125 95 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 Y_RNA.111-201ENST00000363248 100 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 RNU6-968P-201ENST00000384076 107 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 RNU6-933P-201ENST00000384424 107 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 RNU6-790P-201ENST00000384479 105 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 MIR208B-201ENST00000401172 77 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 FGF7P8-201ENST00000402994 292 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AC004866.1-201ENST00000411748 78 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 MTND3P8-201ENST00000412909 339 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 USP9YP30-201ENST00000430729 455 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.33□□□□□ -2.2
MRPL3P09001 HMGN2P18-201ENST00000450680 270 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.33□□□□□ -2.2
MRPL3P09001 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 RNU6-1098P-201ENST00000516772 96 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 EIF4A1P12-201ENST00000551910 141 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.33□□□□□ -2.2
MRPL3P09001 MIR4790-201ENST00000577799 79 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AC011494.1-201ENST00000596454 237 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AL158827.2-201ENST00000602494 330 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AC016727.2-201ENST00000603988 621 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AC124303.1-201ENST00000605703 360 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AC019193.3-201ENST00000609144 554 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 AL691447.3-201ENST00000635020 330 ntBASIC1.33□□□□□ -2.2
MRPL3P09001 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.33□□□□□ -2.2
MRPL3P09001 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
MRPL3P09001 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MRPL3P09001 CBX3P1-201ENST00000325243 554 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 MIR424-201ENST00000362227 98 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 RNU6-26P-201ENST00000383985 107 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 U8.10-201ENST00000384260 133 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MRPL3P09001 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MRPL3P09001 RNU6-1093P-201ENST00000391194 107 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 RNU6-510P-201ENST00000391239 108 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 MIR548K-201ENST00000408406 116 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 MIR548F5-201ENST00000408421 86 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 RNU6-174P-201ENST00000410406 106 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL3P09001 EIF4EP2-201ENST00000422816 654 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 AL590556.1-201ENST00000423231 483 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 MTND4LP16-201ENST00000440828 295 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 DAP3P1-201ENST00000441522 278 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL3P09001 TOMM22P6-201ENST00000465035 409 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 AC087477.1-201ENST00000465747 340 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL3P09001 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL3P09001 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 RNU6-295P-201ENST00000516901 104 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL3P09001 AC016256.1-201ENST00000547971 354 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.32□□□□□ -2.2
MRPL3P09001 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.32□□□□□ -2.2
MRPL3P09001 POLR3GP2-201ENST00000588366 668 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 AC011712.1-201ENST00000588959 234 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.32□□□□□ -2.2
MRPL3P09001 AC093913.1-201ENST00000614178 329 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 MIR6128-201ENST00000615528 109 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 U1.36-201ENST00000620684 176 ntBASIC1.32□□□□□ -2.2
MRPL3P09001 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.32□□□□□ -2.2
MRPL3P09001 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MRPL3P09001 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MRPL3P09001 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
MRPL3P09001 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MRPL3P09001 AC233981.2-201ENST00000611524 1614 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 Y_RNA.72-201ENST00000362894 103 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 SNORD114-6-201ENST00000364393 72 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 RNU4-56P-201ENST00000364700 142 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 RNU6-439P-201ENST00000384188 106 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 Y_RNA.533-201ENST00000384596 114 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
MRPL3P09001 RNU6-876P-201ENST00000391295 104 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MRPL3P09001 RNA5SP494-201ENST00000410653 129 ntBASIC1.31□□□□□ -2.2
MRPL3P09001 RNU4-14P-201ENST00000410858 122 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms