Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
THBS1P07996 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
THBS1P07996 Y_RNA.203-201ENST00000364106 102 ntBASIC3.83□□□□□ -1.8
THBS1P07996 RNU6-1138P-201ENST00000365359 106 ntBASIC3.83□□□□□ -1.8
THBS1P07996 SNORA37-201ENST00000384504 129 ntBASIC3.83□□□□□ -1.8
THBS1P07996 CRYBB2P1-203ENST00000415709 538 ntBASIC3.83□□□□□ -1.8
THBS1P07996 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.83□□□□□ -1.8
THBS1P07996 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.83□□□□□ -1.8
THBS1P07996 RNU6-221P-201ENST00000459541 99 ntBASIC3.83□□□□□ -1.8
THBS1P07996 RNU6-638P-201ENST00000516582 104 ntBASIC3.83□□□□□ -1.8
THBS1P07996 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
THBS1P07996 AL110115.1-201ENST00000614396 364 ntBASIC3.83□□□□□ -1.8
THBS1P07996 AC009831.4-201ENST00000620744 325 ntBASIC3.83□□□□□ -1.8
THBS1P07996 MIR3653-201ENST00000625572 110 ntBASIC3.83□□□□□ -1.8
THBS1P07996 RNA5SP196-201ENST00000625967 102 ntBASIC3.83□□□□□ -1.8
THBS1P07996 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.83□□□□□ -1.8
THBS1P07996 AC010733.2-201ENST00000589496 5702 ntBASIC3.83□□□□□ -1.8
THBS1P07996 AL672296.1-201ENST00000427780 2158 ntBASIC3.83□□□□□ -1.8
THBS1P07996 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.83□□□□□ -1.8
THBS1P07996 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.82□□□□□ -1.8
THBS1P07996 AC058791.1-201ENST00000608412 3198 ntBASIC3.82□□□□□ -1.8
THBS1P07996 MIR181A2-201ENST00000384863 110 ntBASIC3.82□□□□□ -1.8
THBS1P07996 AC063976.3-201ENST00000426849 329 ntBASIC3.82□□□□□ -1.8
THBS1P07996 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.82□□□□□ -1.8
THBS1P07996 AC010531.2-201ENST00000465012 153 ntBASIC3.82□□□□□ -1.8
THBS1P07996 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
THBS1P07996 COX6CP6-201ENST00000490840 228 ntBASIC3.82□□□□□ -1.8
THBS1P07996 RNA5SP281-201ENST00000516504 135 ntBASIC3.82□□□□□ -1.8
THBS1P07996 RNA5SP309-201ENST00000516670 106 ntBASIC3.82□□□□□ -1.8
THBS1P07996 RPL23AP91-201ENST00000569211 455 ntBASIC3.82□□□□□ -1.8
THBS1P07996 MIR3690-201ENST00000580266 75 ntBASIC3.82□□□□□ -1.8
THBS1P07996 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
THBS1P07996 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
THBS1P07996 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.82□□□□□ -1.8
THBS1P07996 AC010889.1-201ENST00000566193 2666 ntBASIC3.82□□□□□ -1.8
THBS1P07996 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
THBS1P07996 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.81□□□□□ -1.8
THBS1P07996 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 snoU2_19.1-201ENST00000362361 80 ntBASIC3.81□□□□□ -1.8
THBS1P07996 RNU1-132P-201ENST00000364300 164 ntBASIC3.81□□□□□ -1.8
THBS1P07996 RNU6-1131P-201ENST00000364955 107 ntBASIC3.81□□□□□ -1.8
THBS1P07996 Y_RNA.388-201ENST00000383919 113 ntBASIC3.81□□□□□ -1.8
THBS1P07996 MIR29B2-201ENST00000385055 81 ntBASIC3.81□□□□□ -1.8
THBS1P07996 MIR23A-201ENST00000385245 73 ntBASIC3.81□□□□□ -1.8
THBS1P07996 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
THBS1P07996 SNORA3C-201ENST00000408792 125 ntBASIC3.81□□□□□ -1.8
THBS1P07996 AC023141.4-201ENST00000412031 328 ntBASIC3.81□□□□□ -1.8
THBS1P07996 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.81□□□□□ -1.8
THBS1P07996 HMGN2P32-201ENST00000444648 269 ntBASIC3.81□□□□□ -1.8
THBS1P07996 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.81□□□□□ -1.8
THBS1P07996 RNA5SP310-201ENST00000459084 116 ntBASIC3.81□□□□□ -1.8
THBS1P07996 RPL27AP5-201ENST00000469428 449 ntBASIC3.81□□□□□ -1.8
THBS1P07996 OR9P1P-201ENST00000496431 281 ntBASIC3.81□□□□□ -1.8
THBS1P07996 AC099522.1-202ENST00000514718 367 ntBASIC3.81□□□□□ -1.8
THBS1P07996 RNU6-365P-201ENST00000517113 106 ntBASIC3.81□□□□□ -1.8
THBS1P07996 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.81□□□□□ -1.8
THBS1P07996 AC022655.2-201ENST00000577280 318 ntBASIC3.81□□□□□ -1.8
THBS1P07996 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.81□□□□□ -1.8
THBS1P07996 MIR4727-201ENST00000622232 55 ntBASIC3.81□□□□□ -1.8
THBS1P07996 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
THBS1P07996 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
THBS1P07996 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
THBS1P07996 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
THBS1P07996 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
THBS1P07996 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
THBS1P07996 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
THBS1P07996 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
THBS1P07996 RNU6-508P-201ENST00000363231 103 ntBASIC3.8□□□□□ -1.8
THBS1P07996 SNORD32B-201ENST00000364460 84 ntBASIC3.8□□□□□ -1.8
THBS1P07996 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
THBS1P07996 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.8□□□□□ -1.8
THBS1P07996 RPL32P34-201ENST00000486380 400 ntBASIC3.8□□□□□ -1.8
THBS1P07996 RPL29P14-201ENST00000495837 428 ntBASIC3.8□□□□□ -1.8
THBS1P07996 ATP5EP1-201ENST00000510257 156 ntBASIC3.8□□□□□ -1.8
THBS1P07996 RNU7-143P-201ENST00000516781 65 ntBASIC3.8□□□□□ -1.8
THBS1P07996 MRPL49P2-201ENST00000521066 465 ntBASIC3.8□□□□□ -1.8
THBS1P07996 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.8□□□□□ -1.8
THBS1P07996 TVP23BP1-201ENST00000557500 617 ntBASIC3.8□□□□□ -1.8
THBS1P07996 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.8□□□□□ -1.8
THBS1P07996 AC015720.1-201ENST00000565251 277 ntBASIC3.8□□□□□ -1.8
THBS1P07996 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.8□□□□□ -1.8
THBS1P07996 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.8□□□□□ -1.8
THBS1P07996 RNU6-94P-201ENST00000607728 107 ntBASIC3.8□□□□□ -1.8
THBS1P07996 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
THBS1P07996 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
THBS1P07996 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
THBS1P07996 AL589743.1-201ENST00000551932 2712 ntBASIC3.79□□□□□ -1.8
THBS1P07996 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.79□□□□□ -1.8
THBS1P07996 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
THBS1P07996 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
THBS1P07996 SNORA60-201ENST00000362396 134 ntBASIC3.79□□□□□ -1.8
THBS1P07996 SNORA12-201ENST00000391162 147 ntBASIC3.79□□□□□ -1.8
THBS1P07996 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.79□□□□□ -1.8
THBS1P07996 AC008134.1-201ENST00000420943 193 ntBASIC3.79□□□□□ -1.8
THBS1P07996 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms