Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR605-201ENST00000385078 83 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 SNORA16.2-201ENST00000390991 127 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 RNA5SP323-201ENST00000391094 133 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 RNA5SP467-201ENST00000391274 118 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 TIMM9P3-201ENST00000428659 274 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AC079781.2-201ENST00000446424 169 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 snoU13.6-201ENST00000458785 104 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 TRBVA-201ENST00000498804 316 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 RNU6-1146P-201ENST00000516282 102 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 MIR5000-201ENST00000577717 103 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 Z99497.2-201ENST00000603634 310 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AC005562.2-201ENST00000618264 111 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AC106754.2-201ENST00000623006 233 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 AL359697.1-201ENST00000624879 587 ntBASIC0.55□□□□□ -2.32
HLA-DQB2P05538 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.55□□□□□ -2.32
HLA-DQB2P05538 RNU6-434P-201ENST00000384376 107 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 MIR549A-201ENST00000385268 96 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 SNORA12.1-201ENST00000390873 148 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AF228730.1-201ENST00000397972 663 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 RNU6-1069P-201ENST00000516612 133 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AC025423.5-201ENST00000550230 219 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AGGF1P4-201ENST00000568249 801 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AL512605.2-201ENST00000592972 256 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AC022217.4-201ENST00000604389 163 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.54□□□□□ -2.32
HLA-DQB2P05538 AC010608.3-201ENST00000625048 527 ntBASIC0.54□□□□□ -2.32
HLA-DQB2P05538 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
HLA-DQB2P05538 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNU6-266P-201ENST00000364225 107 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNU6-969P-201ENST00000383900 105 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNU6-1029P-201ENST00000384109 107 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNU6-1127P-201ENST00000384580 107 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 SNORD70.1-201ENST00000391007 85 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 MIR1287-201ENST00000408492 90 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC004866.1-201ENST00000411748 78 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RPS3AP1-201ENST00000413190 320 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.53□□□□□ -2.32
HLA-DQB2P05538 GPR143P-201ENST00000434155 205 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC004386.2-201ENST00000441858 148 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNU7-182P-201ENST00000459009 62 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 SRRM1P2-201ENST00000464531 1192 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC105758.1-201ENST00000506038 399 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC079140.5-201ENST00000507882 310 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC016256.1-201ENST00000547971 354 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC026470.2-201ENST00000561492 181 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.53□□□□□ -2.32
HLA-DQB2P05538 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AC068790.6-201ENST00000602558 258 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 TUSC7.1-201ENST00000610969 165 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 GHRLOS.1-201ENST00000610995 70 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 AL603839.4-201ENST00000624658 1005 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 SEPT14P19-203ENST00000633205 211 ntBASIC0.53□□□□□ -2.32
HLA-DQB2P05538 MIR1253-201ENST00000408273 105 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 Y_RNA.598-201ENST00000410480 95 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 MTCO2P8-201ENST00000412213 658 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 SSR1P2-201ENST00000415208 787 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC016909.1-201ENST00000415916 166 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 RPS26P5-201ENST00000418544 335 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC004854.1-201ENST00000440356 349 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 NFU1P2-201ENST00000448700 469 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 RPS26P48-201ENST00000491713 339 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 RNU6-1223P-201ENST00000517124 104 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AL391840.1-201ENST00000571144 367 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 MIR4703-201ENST00000577728 79 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 MIR5006-201ENST00000583027 110 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 RSL24D1P11-201ENST00000591045 491 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC097065.2-201ENST00000608159 533 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AP000240.1-201ENST00000609910 452 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 TCL6_2.1-201ENST00000615162 119 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AL513423.1-201ENST00000621695 132 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 SNORD3E-202ENST00000627253 216 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 AC023934.1-201ENST00000574529 2389 ntBASIC0.52□□□□□ -2.33
HLA-DQB2P05538 MIR620-201ENST00000385232 95 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 SNORD41-201ENST00000386967 70 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 MIR942-201ENST00000401111 86 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 RPS26P42-201ENST00000413485 326 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 MTCO3P18-201ENST00000440206 761 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AC009237.7-201ENST00000447357 229 ntBASIC0.51□□□□□ -2.33
HLA-DQB2P05538 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms