Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.676-201ENST00000516393 96 ntBASIC1.19□□□□□ -2.22
CD74P04233 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.19□□□□□ -2.22
CD74P04233 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.19□□□□□ -2.22
CD74P04233 SCOCP1-201ENST00000554676 349 ntBASIC1.19□□□□□ -2.22
CD74P04233 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.19□□□□□ -2.22
CD74P04233 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.19□□□□□ -2.22
CD74P04233 AL162413.1-201ENST00000603198 110 ntBASIC1.19□□□□□ -2.22
CD74P04233 AC064807.4-201ENST00000607201 407 ntBASIC1.19□□□□□ -2.22
CD74P04233 snoU13.31-201ENST00000607291 104 ntBASIC1.19□□□□□ -2.22
CD74P04233 AF250324.2-201ENST00000608299 610 ntBASIC1.19□□□□□ -2.22
CD74P04233 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.19□□□□□ -2.22
CD74P04233 FAM157A-202ENST00000615155 405 ntBASIC1.19□□□□□ -2.22
CD74P04233 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.19□□□□□ -2.22
CD74P04233 AL136221.1-201ENST00000621449 509 ntBASIC1.19□□□□□ -2.22
CD74P04233 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.19□□□□□ -2.22
CD74P04233 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CD74P04233 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CD74P04233 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
CD74P04233 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CD74P04233 MIR340-201ENST00000362125 95 ntBASIC1.18□□□□□ -2.22
CD74P04233 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
CD74P04233 RNU6-522P-201ENST00000364497 107 ntBASIC1.18□□□□□ -2.22
CD74P04233 RNU6-968P-201ENST00000384076 107 ntBASIC1.18□□□□□ -2.22
CD74P04233 Y_RNA.436-201ENST00000384097 102 ntBASIC1.18□□□□□ -2.22
CD74P04233 RNU6-439P-201ENST00000384188 106 ntBASIC1.18□□□□□ -2.22
CD74P04233 U8.10-201ENST00000384260 133 ntBASIC1.18□□□□□ -2.22
CD74P04233 RNU6-933P-201ENST00000384424 107 ntBASIC1.18□□□□□ -2.22
CD74P04233 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CD74P04233 AL590002.1-201ENST00000406554 418 ntBASIC1.18□□□□□ -2.22
CD74P04233 RPL23AP36-201ENST00000413895 458 ntBASIC1.18□□□□□ -2.22
CD74P04233 USP9YP28-201ENST00000435142 589 ntBASIC1.18□□□□□ -2.22
CD74P04233 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.18□□□□□ -2.22
CD74P04233 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.18□□□□□ -2.22
CD74P04233 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.18□□□□□ -2.22
CD74P04233 DEFB131C-201ENST00000528817 165 ntBASIC1.18□□□□□ -2.22
CD74P04233 AC087441.2-201ENST00000529141 262 ntBASIC1.18□□□□□ -2.22
CD74P04233 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.18□□□□□ -2.22
CD74P04233 AC026371.1-201ENST00000551867 419 ntBASIC1.18□□□□□ -2.22
CD74P04233 ZNF519P2-201ENST00000557032 169 ntBASIC1.18□□□□□ -2.22
CD74P04233 HMGB1P33-201ENST00000563485 527 ntBASIC1.18□□□□□ -2.22
CD74P04233 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
CD74P04233 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
CD74P04233 CTHRC1P1-201ENST00000605383 469 ntBASIC1.18□□□□□ -2.22
CD74P04233 MIR3976-201ENST00000606807 139 ntBASIC1.18□□□□□ -2.22
CD74P04233 DISC2.1-201ENST00000612827 205 ntBASIC1.18□□□□□ -2.22
CD74P04233 AC005520.5-201ENST00000613926 164 ntBASIC1.18□□□□□ -2.22
CD74P04233 AC083806.3-201ENST00000614016 455 ntBASIC1.18□□□□□ -2.22
CD74P04233 AC022513.1-201ENST00000624512 117 ntBASIC1.18□□□□□ -2.22
CD74P04233 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CD74P04233 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
CD74P04233 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.17□□□□□ -2.22
CD74P04233 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
CD74P04233 Y_RNA.38-201ENST00000362617 102 ntBASIC1.17□□□□□ -2.22
CD74P04233 RNU1-76P-201ENST00000362903 159 ntBASIC1.17□□□□□ -2.22
CD74P04233 Y_RNA.132-201ENST00000363421 102 ntBASIC1.17□□□□□ -2.22
CD74P04233 RNU6-1090P-201ENST00000364065 94 ntBASIC1.17□□□□□ -2.22
CD74P04233 RNU6-877P-201ENST00000383868 107 ntBASIC1.17□□□□□ -2.22
CD74P04233 RNU6-418P-201ENST00000384035 107 ntBASIC1.17□□□□□ -2.22
CD74P04233 RPL21P111-201ENST00000418453 477 ntBASIC1.17□□□□□ -2.22
CD74P04233 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
CD74P04233 Z82205.1-201ENST00000428456 297 ntBASIC1.17□□□□□ -2.22
CD74P04233 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
CD74P04233 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.17□□□□□ -2.22
CD74P04233 AC004386.2-201ENST00000441858 148 ntBASIC1.17□□□□□ -2.22
CD74P04233 RNU1-131P-201ENST00000458943 161 ntBASIC1.17□□□□□ -2.22
CD74P04233 AC010409.1-201ENST00000487382 476 ntBASIC1.17□□□□□ -2.22
CD74P04233 MTCO1P29-201ENST00000496868 288 ntBASIC1.17□□□□□ -2.22
CD74P04233 RNA5SP445-201ENST00000515889 115 ntBASIC1.17□□□□□ -2.22
CD74P04233 SNORA31.17-201ENST00000516953 127 ntBASIC1.17□□□□□ -2.22
CD74P04233 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.17□□□□□ -2.22
CD74P04233 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.17□□□□□ -2.22
CD74P04233 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.17□□□□□ -2.22
CD74P04233 AC005786.1-201ENST00000588553 154 ntBASIC1.17□□□□□ -2.22
CD74P04233 AC016727.2-201ENST00000603988 621 ntBASIC1.17□□□□□ -2.22
CD74P04233 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.17□□□□□ -2.22
CD74P04233 AC068137.3-201ENST00000639191 341 ntBASIC1.17□□□□□ -2.22
CD74P04233 AL159152.1-201ENST00000635019 2587 ntBASIC1.17□□□□□ -2.22
CD74P04233 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CD74P04233 AC121333.1-201ENST00000567488 2709 ntBASIC1.17□□□□□ -2.22
CD74P04233 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU5B-2P-201ENST00000363036 113 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU4-24P-201ENST00000364565 139 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU6-1286P-201ENST00000383871 107 ntBASIC1.16□□□□□ -2.22
CD74P04233 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU6-790P-201ENST00000384479 105 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.16□□□□□ -2.22
CD74P04233 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CD74P04233 FTH1P12-201ENST00000432137 551 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC016925.1-201ENST00000458303 298 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU7-187P-201ENST00000458985 68 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC010531.2-201ENST00000465012 153 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC005908.1-201ENST00000468701 347 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.16□□□□□ -2.22
CD74P04233 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.16□□□□□ -2.22
CD74P04233 Y_RNA.665-201ENST00000516177 98 ntBASIC1.16□□□□□ -2.22
CD74P04233 RNU6-506P-201ENST00000516553 94 ntBASIC1.16□□□□□ -2.22
CD74P04233 SNORA31.24-201ENST00000517232 57 ntBASIC1.16□□□□□ -2.22
CD74P04233 SUMO2P18-201ENST00000518873 252 ntBASIC1.16□□□□□ -2.22
CD74P04233 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CD74P04233 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms